Factsheet for Os12t0636200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0182800-01
Os03t0123500-02
Os03t0673000-00
Os03t0673500-00
Os03t0727000-02
Os03t0727200-00
Os03t0771500-01
Os03t0772100-00
Os06t0646600-01
Os07t0129700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G16400.1	Os03t0123500-02	AT1G62990.1	15781858
AT2G16400.1	Os03t0673000-00	AT4G08150.1	15781858
AT2G16400.1	Os03t0673500-00	AT4G08150.1	15781858
AT2G16400.1	Os03t0727000-02	AT4G08150.1	15781858
AT2G16400.1	Os03t0727200-00	AT4G08150.1	15781858
AT2G16400.1	Os03t0771500-01	AT4G08150.1	15781858
AT2G16400.1	Os03t0772100-00	AT4G08150.1	15781858
AT2G16400.1	Os07t0129700-01	AT4G08150.1	15781858
AT2G16400.1	Os03t0673000-00	AT4G08150.1	21798944
AT2G16400.1	Os03t0673500-00	AT4G08150.1	21798944
AT2G16400.1	Os03t0727000-02	AT4G08150.1	21798944
AT2G16400.1	Os03t0727200-00	AT4G08150.1	21798944
AT2G16400.1	Os03t0771500-01	AT4G08150.1	21798944
AT2G16400.1	Os03t0772100-00	AT4G08150.1	21798944
AT2G16400.1	Os07t0129700-01	AT4G08150.1	21798944
AT2G16400.1	Os02t0182800-01	AT4G32040.1	15781858
AT2G16400.1	Os06t0646600-01	AT4G32040.1	15781858
AT2G16400.1	Os02t0182800-01	AT5G25220.1	15781858
AT2G16400.1	Os06t0646600-01	AT5G25220.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G007800.1	Wheat	nucleus	87.79	87.38
TraesCS5D01G013300.1	Wheat	nucleus	87.64	87.23
HORVU5Hr1G001090.1	Barley	nucleus	86.55	86.29
KXG24130	Sorghum	nucleus	87.17	85.71
TraesCS5B01G006400.1	Wheat	nucleus	87.33	83.95
Zm00001d031182_P002	Maize	nucleus	76.97	74.55
Os03t0680800-02	Rice	nucleus	74.19	71.11
GSMUA_Achr1P23300_001	Banana	extracellular	37.56	56.25
GSMUA_Achr9P21580_001	Banana	nucleus	42.81	50.73
GSMUA_Achr4P13590_001	Banana	nucleus	42.81	48.68
CDY02261	Canola	nucleus	33.23	47.88
Bra013076.1-P	Field mustard	nucleus	33.23	47.78
Bra013075.1-P	Field mustard	nucleus	31.38	47.65
GSMUA_Achr3P29230_001	Banana	nucleus	33.23	47.57
CDX89711	Canola	nucleus	33.23	47.25
GSMUA_Achr4P06630_001	Banana	nucleus	40.19	45.94
AT2G16400.1	Thale cress	nucleus	34.16	45.85
VIT_03s0038g00050.t01	Wine grape	nucleus	47.76	44.72
CDY46209	Canola	nucleus	26.12	44.71
Bra017666.1-P	Field mustard	nucleus	35.86	43.94
Bra001976.1-P	Field mustard	nucleus	29.52	43.02
AT4G34610.3	Thale cress	nucleus	35.09	42.67
Os03t0165300-02	Rice	endoplasmic reticulum, vacuole	39.72	41.92
CDX71279	Canola	nucleus	22.26	37.11
Os11t0158600-00	Rice	nucleus	22.87	35.24
Os03t0680700-00	Rice	nucleus	17.47	32.66
CDY45321	Canola	nucleus, plastid	32.61	30.8
Os06t0108900-02	Rice	nucleus	23.96	29.25
GSMUA_Achr2P06420_001	Banana	nucleus	16.23	28.46
Os10t0534900-01	Rice	nucleus	24.57	27.13
Os03t0124000-01	Rice	nucleus	24.42	26.73
Os11t0158832-00	Rice	nucleus	10.36	25.48
Os05t0455200-01	Rice	nucleus	21.79	24.31
Os03t0732100-01	Rice	nucleus	28.9	23.67
Os01t0848400-01	Rice	nucleus	21.48	22.71
Os06t0562300-00	Rice	nucleus	16.69	19.82
Os02t0226600-01	Rice	nucleus	16.07	19.3

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	EntrezGene:4352890	ProteinID:ABA99971.1	EMBL:AK070465	ProteinID:BAF30382.1
ProteinID:BAT18254.1	ProteinID:BAT18255.1	ncoils:Coil	ProteinID:EAZ21338.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	EnsemblPlantsGene:Os12g0636200	EnsemblPlants:Os12t0636200-01
PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF191
UniProt:Q2QLM6	SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI0000680B6C	RefSeq:XP_015619822.1
RefSeq:XP_015619823.1	SEG:seg	:	:	:	:

Description

Similar to Prep (Fragment). (Os12t0636200-01);Similar to Benzothiadiazole-induced homeodomain protein 1. (Os12t0636200-02);Similar to Benzothiadiazole-induced homeodomain protein 1. (Os12t0636200-03)

Coordinates

chr12:-:27271708..27276782

Molecular Weight (calculated)

72102.4 Da

IEP (calculated)

6.121

GRAVY (calculated)

-0.754

Length

647 amino acids

Sequence
(BLAST)

001: MATYYSSPGS ERDSQTMYSR DPGSASYPMS SALGNLLYLN NPSSGPYTEF SGILQPQQNC MEMPGPGHAS AMSQDPSSRE SDMLSSHQGQ RSFSHVKDMK
101: NEMLMHMMDG AQGSGSELIH DDAHTGSQLE FGVLNNHNSS SVPSMQSQGL SLSLNTQIMA PSLPYWSIKP DMLTPQSYHD NLRGEDMRMK NLQSEASRAI
201: RNSRYLKAAQ ELLDEVVSVW KSIKQKAQKE KVESGKADGK ETDGGPKSEG VSSNPQESGA NAAPELSTAE KQELQNKMAK LMAMLDEVDR KYKHYYHQMQ
301: TVVSSFDVVA GPGSAKPYTA VALQTISRHF RCLKDAINDQ INVIRKKLGE EENSSGKEGK LTRLRYIDQQ LRQQRAFQQY GMIPQNAWRP QRGLPENSVT
401: ILRAWLFEHF LHPYPKDSEK LMLARQTGLT RSQISNWFIN ARVRLWKPMI EDMYKEEIGD LEQDSNSSSD NAPRSKDKMA SSEDKEDLKN SRARICETSQ
501: LSESRTSIGA MNVGGAPVGF QNEPNPDDSF MNLMLKDQRS NEVDGGLLLH NTVAQHSDEN ARFMAYHLAE LGRYGNGNVS LTLGLQHSSS NLVPNAQPGF
601: PGVNEDDIYN ATAPLGVTVA SSDYDSMNQM DQRQRFEHSP LLHDFVA

Best Arabidopsis Sequence Match ( AT4G34610.2 )
(BLAST)

001: MENYPETQFI PGDSMIQNAI VSYSEESAGR ERRTEANNVS ASQERQALSR FGGVPQMQNI GQDFGSWRDQ ASDRNGFQLM SAMAGATGIL QTGQGLSLSL
101: GSQILPGIHQ ISHQNMAPRG NEYATQSFPG GNQNLDVVRT IPNSKYLKAA QQLLDEAVNV KKALKQFQAE GDKNNENPQE PNQSTQDSST NPPADISQSE
201: RQEMQSKLTK LLSMLDEVDR RYKQYYQQMQ IVVSSFDVIA GYGAAKPYTA LALQTISRHF RSLRDAISGQ ILVLRKCLGE QQDGSDGKRV GIISRLKYVD
301: QHLRQQRGFM QPQAWRPQRG LPENSVLILR AWLFEHFLHP YPKDSDKIML ARQTGLSRGQ VSNWFINARV RLWKPMVEEI YKEEFTENDS NSSSENTPKM
401: SEIGPVAADD EDRAREFSQD QTKPDHGHGY GEETRGMVQG SHMDGRRFMA VEPTYHVADT SRLGRGDVSL TLGLQNSQGQ DNVVAMSSEA YNNFSGVDIY
501: ENAIPGDEME YVNPGSRQNR INSSQLVHDF VA

Arabidopsis Description

BLH6BEL1-like homeodomain protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O65685]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.