Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| cytosol:
15604716
nucleus: 15604716 |
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G268200.1 | Wheat | nucleus | 83.38 | 85.3 |
| TraesCS2A01G267400.1 | Wheat | nucleus | 83.38 | 85.3 |
| Zm00001d018742_P001 | Maize | nucleus | 84.23 | 85.19 |
| TraesCS2D01G256400.1 | Wheat | nucleus | 83.1 | 85.01 |
| EER95833 | Sorghum | nucleus | 84.23 | 83.99 |
| Os03t0673000-00 | Rice | nucleus | 18.03 | 83.12 |
| Zm00001d007842_P002 | Maize | nucleus | 82.82 | 81.67 |
| HORVU2Hr1G061320.3 | Barley | nucleus, plastid | 81.13 | 80.45 |
| CDY34012 | Canola | nucleus | 38.87 | 71.5 |
| GSMUA_Achr10P... | Banana | nucleus | 43.38 | 59.23 |
| VIT_18s0001g08380.t01 | Wine grape | nucleus | 57.18 | 54.86 |
| Os03t0727000-02 | Rice | nucleus | 54.65 | 53.74 |
| Solyc04g077210.2.1 | Tomato | nucleus | 53.52 | 53.52 |
| PGSC0003DMT400012712 | Potato | nucleus | 53.52 | 52.78 |
| Os03t0771500-01 | Rice | nucleus | 49.58 | 52.38 |
| KRH61471 | Soybean | nucleus | 52.96 | 52.08 |
| KRH15482 | Soybean | nucleus | 55.77 | 51.43 |
| Bra000638.1-P | Field mustard | nucleus | 56.06 | 51.42 |
| KRG88661 | Soybean | nucleus | 56.06 | 51.42 |
| CDX83145 | Canola | nucleus | 56.06 | 49.5 |
| AT4G08150.1 | Thale cress | nucleus | 55.49 | 49.5 |
| Os01t0302500-01 | Rice | nucleus | 38.87 | 45.85 |
| Os05t0129700-01 | Rice | nucleus | 38.87 | 44.37 |
| Os03t0727200-00 | Rice | nucleus | 44.23 | 43.01 |
| CDY68624 | Canola | nucleus | 41.97 | 42.69 |
| Os03t0673500-00 | Rice | nucleus | 38.59 | 39.83 |
| Os08t0292900-01 | Rice | nucleus, plasma membrane | 20.56 | 34.6 |
| Os03t0772100-00 | Rice | vacuole | 40.28 | 34.38 |
| Os02t0182800-01 | Rice | nucleus | 25.63 | 29.07 |
| Os06t0646600-01 | Rice | nucleus | 26.2 | 28.79 |
| Os03t0123500-02 | Rice | nucleus | 23.1 | 26.11 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.4 | EntrezGene:4342320 | EMBL:AB007623 | EMBL:AB016071 | UniProt:B9FVB7 |
| ProteinID:BAC57683.1 | ProteinID:BAC84729.1 | ProteinID:BAF20732.1 | ProteinID:BAS99916.1 | ProteinID:EEE66504.1 | InterPro:ELK_dom |
| EMBL:FJ940208 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR005539 | InterPro:KNOX1 | InterPro:KNOX2 |
| UniProt:O80416 | EnsemblPlantsGene:Os07g0129700 | EnsemblPlants:Os07t0129700-01 | PFAM:PF03789 | PFAM:PF03790 | PFAM:PF03791 |
| PFAM:PF05920 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS51213 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF203 |
| SMART:SM00389 | SMART:SM01188 | SMART:SM01255 | SMART:SM01256 | SUPFAM:SSF46689 | UniParc:UPI00000A7F56 |
| RefSeq:XP_015646117.1 | SEG:seg | : | : | : | : |
Description
HOMEOBOX 15KNOTTED-type homeodomain protein, KNOX protein, Shoot formation during embryogenesis, Control of seed shattering, Control of internode development, Repression of lignin biosynthesis (Os07t0129700-01)
Coordinates
chr7:+:1566125..1572085
Molecular Weight (calculated)
38592.5 Da
IEP (calculated)
7.000
GRAVY (calculated)
-0.641
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQSFGNLGG GGGAGGSGKA AASSFLQLPL STAAAATAYY GTPLALHQAA AAAGPSQYHG HGHPHHGGGH HHSKHGGAGG GEISAAEAES IKAKIMAHPQ
101: YSALLAAYLD CQKVGAPPEV LERLTATAAK LDARPPGRHD ARDPELDQFM EAYCNMLAKY REELTRPIDE AMEFLKRVES QLDTIAGGAH GGGAGSARLL
201: LADGKSECVG SSEDDMDPSG RENEPPEIDP RAEDKELKFQ LLKKYSGYLS SLRQEFSKKK KKGKLPKEAR QKLLHWWELH YKWPYPSETE KIALAESTGL
301: DQKQINNWFI NQRKRHWKPS EDMPFVMMEG FHPQNAAALY MDGPFMADGM YRLGS
101: YSALLAAYLD CQKVGAPPEV LERLTATAAK LDARPPGRHD ARDPELDQFM EAYCNMLAKY REELTRPIDE AMEFLKRVES QLDTIAGGAH GGGAGSARLL
201: LADGKSECVG SSEDDMDPSG RENEPPEIDP RAEDKELKFQ LLKKYSGYLS SLRQEFSKKK KKGKLPKEAR QKLLHWWELH YKWPYPSETE KIALAESTGL
301: DQKQINNWFI NQRKRHWKPS EDMPFVMMEG FHPQNAAALY MDGPFMADGM YRLGS
001: MEEYQHDNST TPQRVSFLYS PISSSNKNDN TSDTNNNNNN NNSSNYGPGY NNTNNNNHHH QHMLFPHMSS LLPQTTENCF RSDHDQPNNN NNPSVKSEAS
101: SSRINHYSML MRAIHNTQEA NNNNNDNVSD VEAMKAKIIA HPHYSTLLQA YLDCQKIGAP PDVVDRITAA RQDFEARQQR STPSVSASSR DPELDQFMEA
201: YCDMLVKYRE ELTRPIQEAM EFIRRIESQL SMLCQSPIHI LNNPDGKSDN MGSSDEEQEN NSGGETELPE IDPRAEDREL KNHLLKKYSG YLSSLKQELS
301: KKKKKGKLPK EARQKLLTWW ELHYKWPYPS ESEKVALAES TGLDQKQINN WFINQRKRHW KPSEDMQFMV MDGLQHPHHA ALYMDGHYMG DGPYRLGP
101: SSRINHYSML MRAIHNTQEA NNNNNDNVSD VEAMKAKIIA HPHYSTLLQA YLDCQKIGAP PDVVDRITAA RQDFEARQQR STPSVSASSR DPELDQFMEA
201: YCDMLVKYRE ELTRPIQEAM EFIRRIESQL SMLCQSPIHI LNNPDGKSDN MGSSDEEQEN NSGGETELPE IDPRAEDREL KNHLLKKYSG YLSSLKQELS
301: KKKKKGKLPK EARQKLLTWW ELHYKWPYPS ESEKVALAES TGLDQKQINN WFINQRKRHW KPSEDMQFMV MDGLQHPHHA ALYMDGHYMG DGPYRLGP
Arabidopsis Description
KNAT1Homeobox protein knotted-1-like 1 [Source:UniProtKB/Swiss-Prot;Acc:P46639]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.