Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0673000-00 | Rice | nucleus | 33.68 | 84.42 |
| GSMUA_Achr5P01960_001 | Banana | nucleus | 68.39 | 68.75 |
| CDY41449 | Canola | nucleus | 36.79 | 58.68 |
| GSMUA_Achr7P08050_001 | Banana | nucleus | 68.39 | 49.62 |
| GSMUA_Achr4P28270_001 | Banana | nucleus | 68.39 | 48.71 |
| Bra000638.1-P | Field mustard | nucleus | 95.85 | 47.8 |
| CDX83145 | Canola | nucleus | 95.85 | 46.02 |
| AT4G08150.1 | Thale cress | nucleus | 93.26 | 45.23 |
| GSMUA_Achr4P03120_001 | Banana | nucleus | 67.88 | 45.17 |
| Solyc04g077210.2.1 | Tomato | nucleus | 81.35 | 44.23 |
| PGSC0003DMT400012712 | Potato | nucleus | 80.83 | 43.33 |
| GSMUA_Achr10P... | Banana | nucleus | 58.03 | 43.08 |
| VIT_18s0001g08380.t01 | Wine grape | nucleus | 81.35 | 42.43 |
| GSMUA_Achr3P26230_001 | Banana | nucleus | 68.91 | 41.3 |
| KRH61471 | Soybean | nucleus | 77.2 | 41.27 |
| TraesCS2A01G267400.1 | Wheat | nucleus | 71.5 | 39.77 |
| TraesCS2B01G268200.1 | Wheat | nucleus | 71.5 | 39.77 |
| TraesCS2D01G256400.1 | Wheat | nucleus | 70.98 | 39.48 |
| GSMUA_Achr7P27540_001 | Banana | nucleus | 71.5 | 39.43 |
| Zm00001d018742_P001 | Maize | nucleus | 71.5 | 39.32 |
| Os07t0129700-01 | Rice | nucleus | 71.5 | 38.87 |
| EER95833 | Sorghum | nucleus | 71.5 | 38.76 |
| GSMUA_Achr2P13200_001 | Banana | nucleus | 70.47 | 38.75 |
| HORVU2Hr1G061320.3 | Barley | nucleus, plastid | 70.98 | 38.27 |
| Zm00001d007842_P002 | Maize | nucleus | 70.98 | 38.06 |
| Os03t0727000-02 | Rice | nucleus | 70.98 | 37.95 |
| CDY69524 | Canola | nucleus | 39.9 | 37.75 |
| CDY70923 | Canola | nucleus | 39.9 | 37.56 |
| TraesCS5B01G410600.1 | Wheat | nucleus | 61.14 | 37.34 |
| GSMUA_Achr4P32230_001 | Banana | nucleus | 66.32 | 37.1 |
| GSMUA_Achr6P04640_001 | Banana | nucleus | 67.88 | 36.69 |
| TraesCS4A01G256700.1 | Wheat | nucleus | 68.39 | 36.46 |
| TraesCS4D01G058000.1 | Wheat | nucleus | 68.39 | 36.46 |
| TraesCS4B01G057900.1 | Wheat | nucleus | 68.39 | 36.36 |
| HORVU4Hr1G009730.1 | Barley | nucleus | 68.39 | 36.26 |
| Zm00001d033859_P002 | Maize | nucleus | 67.36 | 36.21 |
| EER90950 | Sorghum | nucleus | 66.84 | 35.83 |
| TraesCS5A01G405900.1 | Wheat | nucleus | 60.62 | 35.14 |
| TraesCS5D01G415900.1 | Wheat | nucleus | 61.14 | 34.81 |
| CDY68624 | Canola | nucleus | 61.66 | 34.1 |
| OQU90921 | Sorghum | nucleus | 61.14 | 33.81 |
| TraesCS4A01G292200.1 | Wheat | nucleus | 54.92 | 33.23 |
| TraesCS4B01G021900.2 | Wheat | nucleus | 54.92 | 32.62 |
| HORVU4Hr1G003360.1 | Barley | nucleus | 53.89 | 32.4 |
| EER91090 | Sorghum | nucleus | 54.92 | 31.74 |
| TraesCS4D01G019600.1 | Wheat | nucleus | 54.92 | 31.18 |
| Os03t0771500-01 | Rice | nucleus | 53.89 | 30.95 |
| Zm00001d033861_P001 | Maize | nucleus | 56.99 | 30.56 |
| OQU91064 | Sorghum | nucleus | 57.51 | 29.92 |
| Os03t0727200-00 | Rice | nucleus | 56.48 | 29.86 |
| CDY19545 | Canola | nucleus | 58.03 | 29.24 |
| CDY12943 | Canola | nucleus | 58.03 | 29.24 |
| HORVU5Hr1G098570.6 | Barley | plastid | 61.14 | 29.06 |
| TraesCS4B01G022000.1 | Wheat | nucleus | 44.56 | 28.67 |
| Zm00001d033404_P002 | Maize | nucleus | 54.92 | 28.57 |
| CDX91713 | Canola | nucleus | 45.6 | 28.03 |
| TraesCS4D01G019800.1 | Wheat | nucleus | 46.63 | 27.95 |
| CDY03742 | Canola | nucleus | 47.15 | 27.83 |
| CDY09448 | Canola | nucleus | 47.15 | 27.83 |
| TraesCS4D01G019900.1 | Wheat | nucleus | 46.11 | 27.3 |
| Os03t0673500-00 | Rice | nucleus | 48.19 | 27.03 |
| TraesCS4A01G291900.1 | Wheat | nucleus | 45.6 | 26.75 |
| TraesCS4A01G292100.1 | Wheat | nucleus | 45.6 | 26.67 |
| HORVU4Hr1G003410.3 | Barley | nucleus | 47.15 | 25.78 |
| Os03t0772100-00 | Rice | vacuole | 55.44 | 25.72 |
| CDX93852 | Canola | nucleus | 28.5 | 24.77 |
| Zm00001d034212_P001 | Maize | nucleus | 61.66 | 24.59 |
| CDX88165 | Canola | nucleus | 29.53 | 19.06 |
| CDY45968 | Canola | nucleus | 28.5 | 18.77 |
| CDY64892 | Canola | nucleus | 28.5 | 18.71 |
| CDY66559 | Canola | nucleus | 27.98 | 18.37 |
| CDY51104 | Canola | nucleus | 30.05 | 14.76 |
| CDX85732 | Canola | nucleus | 30.05 | 14.76 |
| CDX78407 | Canola | nucleus | 29.02 | 14.51 |
| CDX75215 | Canola | nucleus | 27.98 | 14.44 |
| CDX68812 | Canola | nucleus | 27.98 | 14.44 |
| CDY13472 | Canola | nucleus | 27.98 | 14.14 |
| CDY05371 | Canola | nucleus | 29.53 | 14.11 |
| CDX70374 | Canola | nucleus | 21.24 | 13.58 |
| CDY05480 | Canola | nucleus | 29.53 | 13.57 |
| CDX72343 | Canola | nucleus | 27.98 | 13.5 |
| Zm00001d013559_P001 | Maize | cytosol, mitochondrion, nucleus | 11.4 | 13.5 |
| CDX80491 | Canola | nucleus | 29.53 | 12.84 |
| CDY44142 | Canola | nucleus | 11.92 | 9.79 |
| TraesCS4A01G251800.1 | Wheat | nucleus | 8.29 | 9.64 |
| CDY04722 | Canola | nucleus | 10.88 | 9.5 |
| TraesCS4A01G292000.1 | Wheat | cytosol, nucleus, plastid | 7.25 | 9.21 |
| CDY41448 | Canola | nucleus | 9.84 | 9.13 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.4 | GO:A0A078H8X7 | UniProt:A0A078H8X7 | EnsemblPlants:CDY34012 | ProteinID:CDY34012 |
| ProteinID:CDY34012.1 | InterPro:ELK_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00055870001 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR005539 |
| InterPro:KNOX2 | PFAM:PF03789 | PFAM:PF03791 | PFAM:PF05920 | ScanProsite:PS00027 | PFscan:PS50071 |
| PFscan:PS51213 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF203 | SMART:SM00389 | SMART:SM01188 | SMART:SM01256 |
| SUPFAM:SSF46689 | UniParc:UPI0004EF277A | SEG:seg | : | : | : |
Description
BnaC03g28030DBnaC03g28030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8X7]
Coordinates
chrLK032326:+:109395..113542
Molecular Weight (calculated)
23069.7 Da
IEP (calculated)
8.413
GRAVY (calculated)
-0.935
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSLYFCLYR KFYQQEAYCD MLVKYREELT RPIEEAMEYI RRIESQISML CQDNNNSGGE AELPEIDPRA EDRELKNHLL KKYSGYLSSL KQELSKKKKK
101: GKLPKEARQK LLTWWELHYK WPYPSESEKV ALAESTGLDQ KQINNWFINQ RKRHWKPSED MQFMVMDGLQ HPHHAALYMD GHYMGDGPYR LGP
101: GKLPKEARQK LLTWWELHYK WPYPSESEKV ALAESTGLDQ KQINNWFINQ RKRHWKPSED MQFMVMDGLQ HPHHAALYMD GHYMGDGPYR LGP
001: MEEYQHDNST TPQRVSFLYS PISSSNKNDN TSDTNNNNNN NNSSNYGPGY NNTNNNNHHH QHMLFPHMSS LLPQTTENCF RSDHDQPNNN NNPSVKSEAS
101: SSRINHYSML MRAIHNTQEA NNNNNDNVSD VEAMKAKIIA HPHYSTLLQA YLDCQKIGAP PDVVDRITAA RQDFEARQQR STPSVSASSR DPELDQFMEA
201: YCDMLVKYRE ELTRPIQEAM EFIRRIESQL SMLCQSPIHI LNNPDGKSDN MGSSDEEQEN NSGGETELPE IDPRAEDREL KNHLLKKYSG YLSSLKQELS
301: KKKKKGKLPK EARQKLLTWW ELHYKWPYPS ESEKVALAES TGLDQKQINN WFINQRKRHW KPSEDMQFMV MDGLQHPHHA ALYMDGHYMG DGPYRLGP
101: SSRINHYSML MRAIHNTQEA NNNNNDNVSD VEAMKAKIIA HPHYSTLLQA YLDCQKIGAP PDVVDRITAA RQDFEARQQR STPSVSASSR DPELDQFMEA
201: YCDMLVKYRE ELTRPIQEAM EFIRRIESQL SMLCQSPIHI LNNPDGKSDN MGSSDEEQEN NSGGETELPE IDPRAEDREL KNHLLKKYSG YLSSLKQELS
301: KKKKKGKLPK EARQKLLTWW ELHYKWPYPS ESEKVALAES TGLDQKQINN WFINQRKRHW KPSEDMQFMV MDGLQHPHHA ALYMDGHYMG DGPYRLGP
Arabidopsis Description
KNAT1Homeobox protein knotted-1-like 1 [Source:UniProtKB/Swiss-Prot;Acc:P46639]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.