Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69524 | Canola | nucleus | 95.61 | 96.08 |
| CDY41449 | Canola | nucleus | 54.15 | 91.74 |
| KRG99390 | Soybean | nucleus | 47.32 | 74.05 |
| Bra024591.1-P | Field mustard | nucleus | 72.2 | 45.12 |
| AT1G23380.2 | Thale cress | nucleus | 65.85 | 41.03 |
| CDX91713 | Canola | nucleus | 61.46 | 40.13 |
| CDY34012 | Canola | nucleus | 37.56 | 39.9 |
| CDY09448 | Canola | nucleus | 60.98 | 38.23 |
| CDY03742 | Canola | nucleus | 60.98 | 38.23 |
| KRH69600 | Soybean | nucleus | 55.12 | 36.69 |
| KRH74562 | Soybean | nucleus | 54.63 | 36.25 |
| VIT_01s0127g00210.t01 | Wine grape | nucleus | 55.12 | 35.53 |
| KRH45633 | Soybean | nucleus | 54.15 | 34.58 |
| Solyc05g005090.2.1 | Tomato | nucleus | 47.32 | 30.31 |
| PGSC0003DMT400035095 | Potato | nucleus | 50.24 | 29.94 |
| CDX93852 | Canola | nucleus | 25.37 | 23.42 |
| CDY12943 | Canola | nucleus | 40.49 | 21.67 |
| CDY19545 | Canola | nucleus | 40.49 | 21.67 |
| CDX83145 | Canola | nucleus | 41.46 | 21.14 |
| CDY45968 | Canola | nucleus | 25.85 | 18.09 |
| CDY66559 | Canola | nucleus | 24.88 | 17.35 |
| CDY64892 | Canola | nucleus | 24.88 | 17.35 |
| CDX88165 | Canola | nucleus | 23.9 | 16.39 |
| CDY68624 | Canola | nucleus | 25.37 | 14.9 |
| CDX75215 | Canola | nucleus | 23.9 | 13.1 |
| CDX68812 | Canola | nucleus | 23.9 | 13.1 |
| CDY13472 | Canola | nucleus | 24.39 | 13.09 |
| CDX72343 | Canola | nucleus | 24.39 | 12.5 |
| CDY51104 | Canola | nucleus | 23.9 | 12.47 |
| CDX78407 | Canola | nucleus | 23.41 | 12.44 |
| CDX85732 | Canola | nucleus | 23.41 | 12.21 |
| CDY05371 | Canola | nucleus | 23.9 | 12.13 |
| CDY44142 | Canola | nucleus | 13.66 | 11.91 |
| CDY05480 | Canola | nucleus | 23.9 | 11.67 |
| CDY04722 | Canola | nucleus | 12.2 | 11.31 |
| CDX80491 | Canola | nucleus | 24.39 | 11.26 |
| CDX70374 | Canola | nucleus | 15.61 | 10.6 |
| CDY41448 | Canola | nucleus | 9.27 | 9.13 |
| KRG99387 | Soybean | nucleus | 6.34 | 6.77 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.4 | GO:A0A078JTL7 | UniProt:A0A078JTL7 | EnsemblPlants:CDY70923 | ProteinID:CDY70923 |
| ProteinID:CDY70923.1 | InterPro:ELK_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00008403001 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR005539 |
| PFAM:PF03789 | PFAM:PF05920 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS51213 | PANTHER:PTHR11850 |
| PANTHER:PTHR11850:SF99 | SMART:SM00389 | SMART:SM01188 | SUPFAM:SSF46689 | UniParc:UPI0004EE7408 | SEG:seg |
Description
BnaCnng70390DBnaCnng70390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JTL7]
Coordinates
chrLK043750:+:1765..2751
Molecular Weight (calculated)
23484.0 Da
IEP (calculated)
6.996
GRAVY (calculated)
-0.612
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MKFGCWGVVW REEHKCEGKC GGCVLMETRL LVLSTDTMTM EVTIHCGGFV LNAALNNRVH PRTTDLTFNF ACAEDGAVSS DEELNGGDEI LQDGKQICED
101: RDLKDRLLRK FGSRISSLKL EFSKKKKKGK LPKEARQALL DWWNVHYKWP YPTEGDKIAL ADATGLDQKQ INNWFINQRK RHWKPSENMP FAMMDDSSGS
201: FFTEE
101: RDLKDRLLRK FGSRISSLKL EFSKKKKKGK LPKEARQALL DWWNVHYKWP YPTEGDKIAL ADATGLDQKQ INNWFINQRK RHWKPSENMP FAMMDDSSGS
201: FFTEE
001: MDGMYNFHSA GDYSDKSVLM MSPESLMFPS DYQALLCSSA GENRVSDVFG SDELLSVAVS ALSSEAASIA PEIRRNDDNV SLTVIKAKIA CHPSYPRLLQ
101: AYIDCQKVGA PPEIACLLEE IQRESDVYKQ EVVPSSCFGA DPELDEFMET YCDILVKYKS DLARPFDEAT CFLNKIEMQL RNLCTGVESA RGVSEDGVIS
201: SDEELSGGDH EVAEDGRQRC EDRDLKDRLL RKFGSRISTL KLEFSKKKKK GKLPREARQA LLDWWNLHYK WPYPTEGDKI ALADATGLDQ KQINNWFINQ
301: RKRHWKPSEN MPFAMMDDSS GSFFTEE
101: AYIDCQKVGA PPEIACLLEE IQRESDVYKQ EVVPSSCFGA DPELDEFMET YCDILVKYKS DLARPFDEAT CFLNKIEMQL RNLCTGVESA RGVSEDGVIS
201: SDEELSGGDH EVAEDGRQRC EDRDLKDRLL RKFGSRISTL KLEFSKKKKK GKLPREARQA LLDWWNLHYK WPYPTEGDKI ALADATGLDQ KQINNWFINQ
301: RKRHWKPSEN MPFAMMDDSS GSFFTEE
Arabidopsis Description
KNAT6KNOTTED1-like homeobox gene 6 [Source:TAIR;Acc:AT1G23380]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.