Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007920.1-P | Field mustard | nucleus | 99.69 | 99.69 |
| CDY09448 | Canola | nucleus | 97.86 | 97.86 |
| AT1G70510.2 | Thale cress | nucleus | 81.35 | 84.71 |
| CDY41449 | Canola | nucleus | 30.28 | 81.82 |
| CDX91713 | Canola | nucleus | 70.64 | 73.57 |
| KRG99390 | Soybean | nucleus | 29.05 | 72.52 |
| CDY04722 | Canola | nucleus | 45.26 | 66.97 |
| KRH69600 | Soybean | nucleus | 62.39 | 66.23 |
| KRH74562 | Soybean | nucleus | 62.39 | 66.02 |
| VIT_01s0127g00210.t01 | Wine grape | nucleus | 63.91 | 65.72 |
| CDY41448 | Canola | nucleus | 41.59 | 65.38 |
| KRH45633 | Soybean | nucleus | 63.91 | 65.11 |
| CDY44142 | Canola | nucleus | 45.26 | 62.98 |
| CDY69524 | Canola | nucleus | 38.84 | 62.25 |
| CDY70923 | Canola | nucleus | 38.23 | 60.98 |
| Solyc05g005090.2.1 | Tomato | nucleus | 56.88 | 58.12 |
| KRG99387 | Soybean | nucleus | 32.42 | 55.21 |
| PGSC0003DMT400035095 | Potato | nucleus | 57.8 | 54.94 |
| CDY34012 | Canola | nucleus | 27.83 | 47.15 |
| CDY19545 | Canola | nucleus | 39.76 | 33.94 |
| CDY12943 | Canola | nucleus | 39.76 | 33.94 |
| CDX83145 | Canola | nucleus | 40.67 | 33.08 |
| CDY68624 | Canola | nucleus | 30.28 | 28.37 |
| CDY45968 | Canola | nucleus | 25.08 | 27.99 |
| CDX93852 | Canola | nucleus | 18.96 | 27.93 |
| CDY64892 | Canola | nucleus | 25.08 | 27.89 |
| CDY66559 | Canola | nucleus | 25.08 | 27.89 |
| CDX88165 | Canola | nucleus | 25.38 | 27.76 |
| CDY51104 | Canola | nucleus | 26.61 | 22.14 |
| CDX78407 | Canola | nucleus | 25.99 | 22.02 |
| CDX85732 | Canola | nucleus | 26.3 | 21.88 |
| CDY05371 | Canola | nucleus | 26.91 | 21.78 |
| CDY13472 | Canola | nucleus | 25.38 | 21.73 |
| CDX68812 | Canola | nucleus | 24.77 | 21.66 |
| CDX70374 | Canola | nucleus | 19.88 | 21.52 |
| CDX75215 | Canola | nucleus | 24.46 | 21.39 |
| CDX72343 | Canola | nucleus | 25.38 | 20.75 |
| CDY05480 | Canola | nucleus | 26.61 | 20.71 |
| CDX80491 | Canola | nucleus | 25.69 | 18.92 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.4 | GO:A0A078ERS1 | EnsemblPlants:CDY03742 | ProteinID:CDY03742 | ProteinID:CDY03742.1 |
| InterPro:ELK_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00116569001 | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_CS | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR005539 | InterPro:KNOX1 |
| InterPro:KNOX2 | PFAM:PF03789 | PFAM:PF03790 | PFAM:PF03791 | PFAM:PF05920 | ScanProsite:PS00027 |
| PFscan:PS50071 | PFscan:PS51213 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF99 | SMART:SM00389 | SMART:SM01188 |
| SMART:SM01255 | SMART:SM01256 | SUPFAM:SSF46689 | UniParc:UPI0004EDD3D0 | SEG:seg | : |
Description
BnaA02g14950D
Coordinates
chrLK031945:-:908985..914171
Molecular Weight (calculated)
36938.2 Da
IEP (calculated)
4.662
GRAVY (calculated)
-0.622
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRMCGFRSA GDYSEKAELM MSSSESLMSL SDYHNLICSS AGENHVFGSN ELFSAAASAL SSEVSIAPPA RRADQDNPSL GLIKSKIASH PLYPRLLQTY
101: IDCQKVGAPL EIACVLEEIQ RENDVYKRDA APLSCFGADP ELDEFMETYC DILVKYKSDL ARPFDEATTF LNKIETQLQD LCTGPASARG LSVSDDGAVS
201: SDEELRESDD VATQDSQQRS NDRELKDQLL RKFGSHISSL KLEFSKKKKK GKLPREARQA LLDWWNVHYK WPYPTEADKI ALAEETGLDQ KQINNWFINQ
301: RKRHWKPSEN MPFAMMDDSS ETFFTEE
101: IDCQKVGAPL EIACVLEEIQ RENDVYKRDA APLSCFGADP ELDEFMETYC DILVKYKSDL ARPFDEATTF LNKIETQLQD LCTGPASARG LSVSDDGAVS
201: SDEELRESDD VATQDSQQRS NDRELKDQLL RKFGSHISSL KLEFSKKKKK GKLPREARQA LLDWWNVHYK WPYPTEADKI ALAEETGLDQ KQINNWFINQ
301: RKRHWKPSEN MPFAMMDDSS ETFFTEE
001: MDRMCGFRST EDYSEKATLM MPSDYQSLIC STTGDNQRLF GSDELATALS SELLPRIRKA EDNFSLSVIK SKIASHPLYP RLLQTYIDCQ KVGAPMEIAC
101: ILEEIQRENH VYKRDVAPLS CFGADPELDE FMETYCDILV KYKTDLARPF DEATTFINKI EMQLQNLCTG PASATALSDD GAVSSDEELR EDDDIAADDS
201: QQRSNDRDLK DQLLRKFGSH ISSLKLEFSK KKKKGKLPRE ARQALLDWWN VHNKWPYPTE GDKISLAEET GLDQKQINNW FINQRKRHWK PSENMPFDMM
301: DDSNETFFTE
101: ILEEIQRENH VYKRDVAPLS CFGADPELDE FMETYCDILV KYKTDLARPF DEATTFINKI EMQLQNLCTG PASATALSDD GAVSSDEELR EDDDIAADDS
201: QQRSNDRDLK DQLLRKFGSH ISSLKLEFSK KKKKGKLPRE ARQALLDWWN VHNKWPYPTE GDKISLAEET GLDQKQINNW FINQRKRHWK PSENMPFDMM
301: DDSNETFFTE
Arabidopsis Description
KNAT2KNOTTED-like from Arabidopsis thaliana 2 [Source:TAIR;Acc:AT1G70510]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.