Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007920.1-P | Field mustard | nucleus | 85.03 | 81.65 |
| CDY03742 | Canola | nucleus | 84.71 | 81.35 |
| CDY09448 | Canola | nucleus | 84.39 | 81.04 |
| AT1G23380.2 | Thale cress | nucleus | 74.84 | 71.43 |
| KRG99390 | Soybean | nucleus | 28.98 | 69.47 |
| KRH74562 | Soybean | nucleus | 63.06 | 64.08 |
| KRH69600 | Soybean | nucleus | 62.42 | 63.64 |
| KRH45633 | Soybean | nucleus | 64.01 | 62.62 |
| VIT_01s0127g00210.t01 | Wine grape | nucleus | 63.38 | 62.58 |
| Solyc05g005090.2.1 | Tomato | nucleus | 56.37 | 55.31 |
| PGSC0003DMT400035095 | Potato | nucleus | 57.64 | 52.62 |
| KRG99387 | Soybean | nucleus | 31.85 | 52.08 |
| AT1G62360.1 | Thale cress | nucleus | 39.49 | 32.46 |
| AT4G08150.1 | Thale cress | nucleus | 41.08 | 32.41 |
| AT1G62990.1 | Thale cress | nucleus | 25.16 | 27.15 |
| AT4G32040.1 | Thale cress | nucleus | 25.8 | 21.15 |
| AT5G11060.1 | Thale cress | nucleus | 26.43 | 21.12 |
| AT5G25220.1 | Thale cress | nucleus | 27.39 | 19.95 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.4 | EntrezGene:843388 | UniProt:A0A1P8ANX6 | ProteinID:ANM58339.1 | ArrayExpress:AT1G70510 |
| EnsemblPlantsGene:AT1G70510 | RefSeq:AT1G70510 | TAIR:AT1G70510 | RefSeq:AT1G70510-TAIR-G | EnsemblPlants:AT1G70510.2 | InterPro:ELK_dom |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_KN_domain |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR005539 | Symbol:KNAT2 | InterPro:KNOX1 | InterPro:KNOX2 |
| RefSeq:NP_001320784.1 | PFAM:PF03789 | PFAM:PF03790 | PFAM:PF03791 | PFAM:PF05920 | ScanProsite:PS00027 |
| PFscan:PS50071 | PFscan:PS51213 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF99 | SMART:SM00389 | SMART:SM01188 |
| SMART:SM01255 | SMART:SM01256 | SUPFAM:SSF46689 | UniParc:UPI0008488274 | SEG:seg | : |
Description
KNAT2KNOTTED-like from Arabidopsis thaliana 2 [Source:TAIR;Acc:AT1G70510]
Coordinates
chr1:+:26576486..26582431
Molecular Weight (calculated)
36110.4 Da
IEP (calculated)
4.706
GRAVY (calculated)
-0.687
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRMCGFRST EDYSEKATLM MPSDYQSLIC STTGDNQRLF GSDELATALS SELLPRIRKA EDNFSLSVIK SKIASHPLYP RLLQTYIDCQ KVGAPMEIAC
101: ILEEIQRENH VYKRDVAPLS CFGADPELDE FMVSHFETYC DILVKYKTDL ARPFDEATTF INKIEMQLQN LCTGPASATA LSDDGAVSSD EELREDDDIA
201: ADDSQQRSND RDLKDQLLRK FGSHISSLKL EFSKKKKKGK LPREARQALL DWWNVHNKWP YPTEGDKISL AEETGLDQKQ INNWFINQRK RHWKPSENMP
301: FDMMDDSNET FFTE
101: ILEEIQRENH VYKRDVAPLS CFGADPELDE FMVSHFETYC DILVKYKTDL ARPFDEATTF INKIEMQLQN LCTGPASATA LSDDGAVSSD EELREDDDIA
201: ADDSQQRSND RDLKDQLLRK FGSHISSLKL EFSKKKKKGK LPREARQALL DWWNVHNKWP YPTEGDKISL AEETGLDQKQ INNWFINQRK RHWKPSENMP
301: FDMMDDSNET FFTE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.