Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006085.1-P | Field mustard | nucleus | 91.6 | 93.26 |
| CDX78407 | Canola | nucleus | 91.6 | 93.26 |
| TraesCS5B01G454600.1 | Wheat | nucleus | 37.4 | 83.52 |
| AT5G25220.1 | Thale cress | nucleus | 84.48 | 77.03 |
| TraesCS6D01G134800.1 | Wheat | nucleus | 39.95 | 75.85 |
| Solyc08g041820.2.1 | Tomato | nucleus | 63.36 | 71.35 |
| PGSC0003DMT400040351 | Potato | nucleus | 63.87 | 68.77 |
| TraesCS1B01G135600.1 | Wheat | nucleus | 48.09 | 67.26 |
| Zm00001d046568_P001 | Maize | nucleus | 53.94 | 67.09 |
| OQU84501 | Sorghum | nucleus | 52.16 | 66.99 |
| KXG20488 | Sorghum | nucleus | 54.2 | 66.77 |
| TraesCS7D01G501000.1 | Wheat | nucleus | 52.42 | 66.67 |
| Os02t0182800-01 | Rice | nucleus | 52.93 | 66.45 |
| TraesCS6B01G173900.1 | Wheat | nucleus | 50.38 | 66.44 |
| TraesCS6A01G145500.1 | Wheat | nucleus | 51.65 | 66.34 |
| Os06t0646600-01 | Rice | nucleus | 53.94 | 65.63 |
| HORVU6Hr1G028610.2 | Barley | nucleus | 51.15 | 65.05 |
| KRH05245 | Soybean | nucleus | 67.68 | 64.72 |
| Zm00001d053749_P002 | Maize | nucleus | 51.65 | 63.64 |
| Zm00001d015549_P001 | Maize | nucleus | 52.16 | 63.08 |
| AT4G32040.1 | Thale cress | nucleus | 60.56 | 62.14 |
| TraesCS7B01G423100.2 | Wheat | nucleus | 52.67 | 61.79 |
| AT1G62990.1 | Thale cress | nucleus | 45.29 | 61.17 |
| HORVU7Hr1G114650.2 | Barley | nucleus | 49.36 | 60.06 |
| TraesCS7A01G511800.2 | Wheat | nucleus | 52.42 | 51.5 |
| AT1G23380.2 | Thale cress | nucleus | 22.39 | 26.75 |
| AT1G70510.2 | Thale cress | nucleus | 21.12 | 26.43 |
| AT4G08150.1 | Thale cress | nucleus | 23.16 | 22.86 |
| AT1G62360.1 | Thale cress | nucleus | 20.87 | 21.47 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.4 | EntrezGene:830973 | UniProt:A0A178UC59 | ProteinID:AED91630.1 | EMBL:AK118296 |
| ArrayExpress:AT5G11060 | EnsemblPlantsGene:AT5G11060 | RefSeq:AT5G11060 | TAIR:AT5G11060 | RefSeq:AT5G11060-TAIR-G | EnsemblPlants:AT5G11060.1 |
| TAIR:AT5G11060.1 | ProteinID:CAC03454.1 | InterPro:ELK_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR005539 | Symbol:KNAT4 | InterPro:KNOX1 | InterPro:KNOX2 |
| RefSeq:NP_196667.2 | ProteinID:OAO90804.1 | UniProt:P48001 | PFAM:PF03789 | PFAM:PF03790 | PFAM:PF03791 |
| PFAM:PF05920 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001031 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0003011 |
| PO:PO:0004507 | PO:PO:0005059 | PO:PO:0005417 | PO:PO:0006203 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025181 | PO:PO:0025257 | PO:PO:0025281 | PFscan:PS50071 | PFscan:PS51213 | PANTHER:PTHR11850 |
| PANTHER:PTHR11850:SF95 | SMART:SM00389 | SMART:SM01188 | SMART:SM01255 | SMART:SM01256 | SUPFAM:SSF46689 |
| UniParc:UPI00000ADEF6 | EMBL:X92393 | SEG:seg | : | : | : |
Description
KNAT4KNAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UC59]
Coordinates
chr5:+:3509833..3513741
Molecular Weight (calculated)
44387.4 Da
IEP (calculated)
6.268
GRAVY (calculated)
-0.856
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFHNNHFNH FTDQQQHQPP PPPQQQQQQH FQESAPPNWL LRSDNNFLNL HTAASAAATS SDSPSSAAAN QWLSRSSSFL QRGNTANNNN NETSGDVIED
101: VPGGEESMIG EKKEAERWQN ARHKAEILSH PLYEQLLSAH VACLRIATPV DQLPRIDAQL AQSQNVVAKY STLEAAQGLL AGDDKELDHF MTHYVLLLCS
201: FKEQLQQHVR VHAMEAVMAC WEIEQSLQSF TGVSPGEGTG ATMSEDEDEQ VESDAHLFDG SLDGLGFGPL VPTESERSLM ERVRQELKHE LKQGYKEKIV
301: DIREEILRKR RAGKLPGDTT SVLKSWWQSH SKWPYPTEED KARLVQETGL QLKQINNWFI NQRKRNWHSN PSSSTVSKNK RRSNAGENSG RDR
101: VPGGEESMIG EKKEAERWQN ARHKAEILSH PLYEQLLSAH VACLRIATPV DQLPRIDAQL AQSQNVVAKY STLEAAQGLL AGDDKELDHF MTHYVLLLCS
201: FKEQLQQHVR VHAMEAVMAC WEIEQSLQSF TGVSPGEGTG ATMSEDEDEQ VESDAHLFDG SLDGLGFGPL VPTESERSLM ERVRQELKHE LKQGYKEKIV
301: DIREEILRKR RAGKLPGDTT SVLKSWWQSH SKWPYPTEED KARLVQETGL QLKQINNWFI NQRKRNWHSN PSSSTVSKNK RRSNAGENSG RDR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.