Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU84501 | Sorghum | nucleus | 92.16 | 96.08 |
| TraesCS6B01G173900.1 | Wheat | nucleus | 85.27 | 91.28 |
| TraesCS6A01G145500.1 | Wheat | nucleus | 87.46 | 91.18 |
| HORVU6Hr1G028610.2 | Barley | nucleus | 87.77 | 90.61 |
| Zm00001d015549_P001 | Maize | nucleus | 90.6 | 88.92 |
| Os02t0182800-01 | Rice | nucleus | 86.83 | 88.5 |
| TraesCS6D01G134800.1 | Wheat | nucleus | 57.37 | 88.41 |
| Zm00001d046568_P001 | Maize | nucleus | 79.94 | 80.7 |
| CDX88165 | Canola | nucleus | 64.26 | 68.56 |
| KRG98594 | Soybean | extracellular | 15.36 | 59.76 |
| Solyc08g041820.2.1 | Tomato | nucleus | 63.95 | 58.45 |
| PGSC0003DMT400040351 | Potato | nucleus | 64.89 | 56.71 |
| Zm00001d027431_P002 | Maize | nucleus | 53.6 | 55.16 |
| Zm00001d048471_P001 | Maize | nucleus | 53.29 | 53.46 |
| Bra006085.1-P | Field mustard | nucleus | 64.26 | 53.11 |
| CDX78407 | Canola | nucleus | 64.26 | 53.11 |
| CDY05371 | Canola | nucleus | 66.77 | 52.72 |
| CDX75215 | Canola | nucleus | 61.76 | 52.67 |
| KRH52385 | Soybean | nucleus | 65.52 | 52.51 |
| KRH61712 | Soybean | nucleus | 67.4 | 52.31 |
| Bra028554.1-P | Field mustard | nucleus | 63.32 | 52.2 |
| CDX68812 | Canola | nucleus | 61.13 | 52.14 |
| Bra011317.1-P | Field mustard | nucleus | 61.13 | 52.14 |
| AT4G32040.1 | Thale cress | nucleus | 62.38 | 51.96 |
| AT5G11060.1 | Thale cress | nucleus | 63.64 | 51.65 |
| KRH05245 | Soybean | nucleus | 66.46 | 51.58 |
| CDY51104 | Canola | nucleus | 63.32 | 51.4 |
| CDX85732 | Canola | nucleus | 63.32 | 51.4 |
| KRH15810 | Soybean | nucleus | 66.14 | 51.21 |
| CDY13472 | Canola | nucleus | 60.81 | 50.79 |
| Bra023965.1-P | Field mustard | nucleus | 60.81 | 50.65 |
| CDY05480 | Canola | nucleus | 66.46 | 50.48 |
| AT5G25220.1 | Thale cress | nucleus | 66.77 | 49.42 |
| CDX72343 | Canola | nucleus | 61.44 | 49.0 |
| Bra009826.1-P | Field mustard | nucleus | 63.01 | 48.55 |
| VIT_04s0008g06130.t01 | Wine grape | nucleus | 64.89 | 48.48 |
| CDX80491 | Canola | nucleus | 64.58 | 46.4 |
| Bra020491.1-P | Field mustard | nucleus | 56.11 | 45.55 |
| CDX70374 | Canola | nucleus | 40.75 | 43.05 |
| Zm00001d010948_P001 | Maize | nucleus | 31.03 | 32.25 |
| Zm00001d035439_P001 | Maize | nucleus | 29.78 | 31.88 |
| Zm00001d040611_P002 | Maize | nucleus | 28.21 | 30.51 |
| Zm00001d033859_P002 | Maize | nucleus | 29.78 | 26.46 |
| Zm00001d018742_P001 | Maize | nucleus | 28.53 | 25.93 |
| Zm00001d007842_P002 | Maize | nucleus | 28.84 | 25.56 |
| Zm00001d033861_P001 | Maize | nucleus | 28.53 | 25.28 |
| Zm00001d033404_P002 | Maize | nucleus | 27.27 | 23.45 |
| Zm00001d013559_P001 | Maize | cytosol, mitochondrion, nucleus | 9.4 | 18.4 |
| Zm00001d034212_P001 | Maize | nucleus | 27.59 | 18.18 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.4 | EntrezGene:732756 | UniProt:A0A1D6QRZ9 | ProteinID:AQK60266.1 | ncoils:Coil |
| InterPro:ELK_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom |
| InterPro:IPR001356 | InterPro:IPR005539 | InterPro:KNOX1 | InterPro:KNOX2 | PFAM:PF03789 | PFAM:PF03790 |
| PFAM:PF03791 | PFAM:PF05920 | PFscan:PS50071 | PFscan:PS51213 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF142 |
| SMART:SM00389 | SMART:SM01188 | SMART:SM01255 | SMART:SM01256 | SUPFAM:SSF46689 | UniParc:UPI0008433552 |
| EnsemblPlantsGene:Zm00001d053749 | EnsemblPlants:Zm00001d053749_P002 | EnsemblPlants:Zm00001d053749_T002 | SEG:seg | : | : |
Description
knotted related homeobox7 knotted related homeobox7
Coordinates
chr4:+:240414110..240417560
Molecular Weight (calculated)
34745.1 Da
IEP (calculated)
6.354
GRAVY (calculated)
-0.431
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFHYHDHGL SMDAAAAAAA AAASSPNPSG FSPGIGGERE KAAIAAHPLY ERLLEAHVAC LRVATPVDQL PRIDAQIAAR PPPLAAAAGA AAAGAAAAGG
101: PSGGEELDLF MAFLFPDSNI FLFLLQTHYV LLLCSFKEQL QQHVRVHAME AVMGCWELEQ SLQSLTGASP GEGTGGTMSD DEDNQVDSEA NMFDGNDGSD
201: GMGFGPLILT EGERSLVERV RKELKNELKQ GYKEKLVDIR EEIMRKRRAG KLPGDTASVL KAWWQAHSKW PYPTEDDKAR LVQETGLQLK QINNWFINQR
301: KRNWHSNPTS SAEKTKKKR
101: PSGGEELDLF MAFLFPDSNI FLFLLQTHYV LLLCSFKEQL QQHVRVHAME AVMGCWELEQ SLQSLTGASP GEGTGGTMSD DEDNQVDSEA NMFDGNDGSD
201: GMGFGPLILT EGERSLVERV RKELKNELKQ GYKEKLVDIR EEIMRKRRAG KLPGDTASVL KAWWQAHSKW PYPTEDDKAR LVQETGLQLK QINNWFINQR
301: KRNWHSNPTS SAEKTKKKR
001: MAFHHNHLSQ DLSFNHFTDQ HQPPPPQPPP PPPQQQQHFQ EAPPPNWLNT ALLRSSDNNN NFLNLHTATA NTTTASSSDS PSSAAAAAAA NQWLSRSSSF
101: LQRNNNNNAS IVGDGIDDVT GGADTMIQGE MKTGGGENKN DGGGATAADG VVSWQNARHK AEILSHPLYE QLLSAHVACL RIATPVDQLP RIDAQLAQSQ
201: HVVAKYSALG AAAQGLVGDD KELDQFMTHY VLLLCSFKEQ LQQHVRVHAM EAVMACWEIE QSLQSLTGVS PGEGMGATMS DDEDEQVESD ANMFDGGLDV
301: LGFGPLIPTE SERSLMERVR QELKHELKQG YKEKIVDIRE EILRKRRAGK LPGDTTSVLK AWWQSHSKWP YPTEEDKARL VQETGLQLKQ INNWFINQRK
401: RNWHSNPSSS TVLKNKRKR
101: LQRNNNNNAS IVGDGIDDVT GGADTMIQGE MKTGGGENKN DGGGATAADG VVSWQNARHK AEILSHPLYE QLLSAHVACL RIATPVDQLP RIDAQLAQSQ
201: HVVAKYSALG AAAQGLVGDD KELDQFMTHY VLLLCSFKEQ LQQHVRVHAM EAVMACWEIE QSLQSLTGVS PGEGMGATMS DDEDEQVESD ANMFDGGLDV
301: LGFGPLIPTE SERSLMERVR QELKHELKQG YKEKIVDIRE EILRKRRAGK LPGDTTSVLK AWWQSHSKWP YPTEEDKARL VQETGLQLKQ INNWFINQRK
401: RNWHSNPSSS TVLKNKRKR
Arabidopsis Description
KNAT3KNAT3 [Source:UniProtKB/TrEMBL;Acc:A0A178U9D1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.