Factsheet for Bra028554.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85732	Canola	nucleus	98.45	96.95
CDY51104	Canola	nucleus	97.16	95.67
Bra006085.1-P	Field mustard	nucleus	90.18	90.41
TraesCS5B01G454600.1	Wheat	nucleus	37.73	82.95
TraesCS6D01G134800.1	Wheat	nucleus	40.31	75.36
Bra009826.1-P	Field mustard	nucleus	77.52	72.46
Bra020491.1-P	Field mustard	nucleus	71.58	70.48
OQU84501	Sorghum	nucleus	52.71	66.67
TraesCS1B01G135600.1	Wheat	nucleus	48.06	66.19
Zm00001d046568_P001	Maize	nucleus	53.75	65.82
TraesCS6B01G173900.1	Wheat	nucleus	50.65	65.77
TraesCS7D01G501000.1	Wheat	nucleus	52.45	65.7
TraesCS6A01G145500.1	Wheat	nucleus	51.94	65.69
KXG20488	Sorghum	nucleus	54.01	65.52
Os02t0182800-01	Rice	nucleus	52.97	65.5
Os06t0646600-01	Rice	nucleus	54.01	64.71
HORVU6Hr1G028610.2	Barley	nucleus	51.42	64.4
Zm00001d053749_P002	Maize	nucleus	52.2	63.32
Zm00001d015549_P001	Maize	nucleus	52.71	62.77
Bra011317.1-P	Field mustard	nucleus	59.17	61.23
TraesCS7B01G423100.2	Wheat	nucleus	52.45	60.6
Bra036636.1-P	Field mustard	nucleus	45.99	60.54
Bra027006.1-P	Field mustard	nucleus	45.99	60.34
HORVU7Hr1G114650.2	Barley	nucleus	49.61	59.44
Bra023965.1-P	Field mustard	nucleus	56.85	57.44
TraesCS7A01G511800.2	Wheat	nucleus	52.45	50.75
Bra016348.1-P	Field mustard	nucleus	22.48	27.71
Bra024591.1-P	Field mustard	nucleus	22.22	26.22
Bra007920.1-P	Field mustard	nucleus	21.96	25.99
Bra000638.1-P	Field mustard	nucleus	23.26	23.26
Bra027050.1-P	Field mustard	nucleus	20.67	20.94
Bra024592.1-P	Field mustard	nucleus	10.85	19.81
Bra024593.1-P	Field mustard	nucleus	10.34	19.14

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.4	EnsemblPlantsGene:Bra028554	EnsemblPlants:Bra028554.1	EnsemblPlants:Bra028554.1-P	InterPro:ELK_dom
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356
InterPro:IPR005539	InterPro:KNOX1	InterPro:KNOX2	UniProt:M4EID9	PFAM:PF03789	PFAM:PF03790
PFAM:PF03791	PFAM:PF05920	PFscan:PS50071	PFscan:PS51213	PANTHER:PTHR11850	PANTHER:PTHR11850:SF95
SMART:SM00389	SMART:SM01188	SMART:SM01255	SMART:SM01256	SUPFAM:SSF46689	UniParc:UPI000254346C
SEG:seg	:	:	:	:	:

Description

AT5G11060 (E=3e-177) KNAT4 | KNAT4 (KNOTTED1-LIKE HOMEOBOX GENE 4); transcription activator/ transcription factor

Coordinates

chrA02:-:1050430..1053735

Molecular Weight (calculated)

43809.1 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.778

Length

387 amino acids

Sequence
(BLAST)

001: MAFHNNHFNH FIDQQHQPPP PSQQQQEHHF HESTPPNWLL RSDNNFLNLQ TAASAAATSS DSPSSAAANQ WLSRSTSFLQ RGGGANNNNV GSGDVIDDVT
101: TGGEESMIGE RKEAERWQNA RHKSEILSHP LYEQLLSAHV ACLRIATPVD QLPRIDAQLA QSQNVVAKYS TMDAAAQGLI SGDEKELDHF MTHYVLLLCS
201: FKEQLQQHVR VHAMEAVMAC WEIEQSLQSL TGVSPGEGTG ATMSEDEDEQ VESDAHLYDG SLDGLGFGPL VPTESERSLM ERVRQELKHE LKQGYKEKIV
301: DIREEILRKR RSGKLPGDTT SVLKAWWQSH SKWPYPTEED KVRLVQETGL QLKQINNWFI NQRKRNWHSN PSSSTVPKNK RRRLIRQ

Best Arabidopsis Sequence Match ( AT5G11060.1 )
(BLAST)

001: MAFHNNHFNH FTDQQQHQPP PPPQQQQQQH FQESAPPNWL LRSDNNFLNL HTAASAAATS SDSPSSAAAN QWLSRSSSFL QRGNTANNNN NETSGDVIED
101: VPGGEESMIG EKKEAERWQN ARHKAEILSH PLYEQLLSAH VACLRIATPV DQLPRIDAQL AQSQNVVAKY STLEAAQGLL AGDDKELDHF MTHYVLLLCS
201: FKEQLQQHVR VHAMEAVMAC WEIEQSLQSF TGVSPGEGTG ATMSEDEDEQ VESDAHLFDG SLDGLGFGPL VPTESERSLM ERVRQELKHE LKQGYKEKIV
301: DIREEILRKR RAGKLPGDTT SVLKSWWQSH SKWPYPTEED KARLVQETGL QLKQINNWFI NQRKRNWHSN PSSSTVSKNK RRSNAGENSG RDR

Arabidopsis Description

KNAT4KNAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UC59]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.