Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d053749_P002 | Maize | nucleus | 96.08 | 92.16 |
| Zm00001d015549_P001 | Maize | nucleus | 97.71 | 92.0 |
| TraesCS6A01G145500.1 | Wheat | nucleus | 91.83 | 91.83 |
| TraesCS6B01G173900.1 | Wheat | nucleus | 89.22 | 91.61 |
| HORVU6Hr1G028610.2 | Barley | nucleus | 92.16 | 91.26 |
| Os02t0182800-01 | Rice | nucleus | 91.5 | 89.46 |
| TraesCS6D01G134800.1 | Wheat | nucleus | 60.13 | 88.89 |
| KXG20488 | Sorghum | nucleus | 85.62 | 82.13 |
| CDX88165 | Canola | nucleus | 67.65 | 69.23 |
| KRG98594 | Soybean | extracellular | 16.01 | 59.76 |
| Solyc08g041820.2.1 | Tomato | nucleus | 66.99 | 58.74 |
| PGSC0003DMT400040351 | Potato | nucleus | 67.65 | 56.71 |
| Bra006085.1-P | Field mustard | nucleus | 67.32 | 53.37 |
| CDX78407 | Canola | nucleus | 67.32 | 53.37 |
| CDY05371 | Canola | nucleus | 70.26 | 53.22 |
| KRH52385 | Soybean | nucleus | 68.95 | 53.02 |
| KXG40306 | Sorghum | nucleus | 55.88 | 52.94 |
| Bra028554.1-P | Field mustard | nucleus | 66.67 | 52.71 |
| KRH61712 | Soybean | nucleus | 70.59 | 52.55 |
| AT5G11060.1 | Thale cress | nucleus | 66.99 | 52.16 |
| CDY51104 | Canola | nucleus | 66.67 | 51.91 |
| CDX85732 | Canola | nucleus | 66.67 | 51.91 |
| CDX75215 | Canola | nucleus | 63.4 | 51.87 |
| KRH05245 | Soybean | nucleus | 69.61 | 51.82 |
| KRH15810 | Soybean | nucleus | 69.61 | 51.7 |
| Bra011317.1-P | Field mustard | nucleus | 63.07 | 51.6 |
| CDX68812 | Canola | nucleus | 63.07 | 51.6 |
| AT4G32040.1 | Thale cress | nucleus | 64.38 | 51.44 |
| CDY05480 | Canola | nucleus | 69.93 | 50.95 |
| CDY13472 | Canola | nucleus | 62.75 | 50.26 |
| Bra023965.1-P | Field mustard | nucleus | 62.75 | 50.13 |
| AT5G25220.1 | Thale cress | nucleus | 70.26 | 49.88 |
| VIT_04s0008g06130.t01 | Wine grape | nucleus | 68.95 | 49.41 |
| Bra009826.1-P | Field mustard | nucleus | 66.34 | 49.03 |
| CDX72343 | Canola | nucleus | 63.4 | 48.5 |
| CDX80491 | Canola | nucleus | 67.97 | 46.85 |
| Bra020491.1-P | Field mustard | nucleus | 59.15 | 46.06 |
| CDX70374 | Canola | nucleus | 42.16 | 42.72 |
| EES18954 | Sorghum | nucleus | 31.37 | 31.68 |
| EES00633 | Sorghum | nucleus | 29.41 | 30.61 |
| EER90950 | Sorghum | nucleus | 31.7 | 26.94 |
| EER95833 | Sorghum | nucleus | 29.41 | 25.28 |
| EER91090 | Sorghum | nucleus | 27.12 | 24.85 |
| OQU91064 | Sorghum | nucleus | 29.74 | 24.53 |
| OQU90921 | Sorghum | nucleus | 27.45 | 24.07 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.4 | UniProt:A0A1Z5RLP9 | ncoils:Coil | InterPro:ELK_dom | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR005539 |
| InterPro:KNOX1 | InterPro:KNOX2 | EnsemblPlants:OQU84501 | ProteinID:OQU84501 | ProteinID:OQU84501.1 | PFAM:PF03789 |
| PFAM:PF03790 | PFAM:PF03791 | PFAM:PF05920 | PFscan:PS50071 | PFscan:PS51213 | PANTHER:PTHR11850 |
| PANTHER:PTHR11850:SF142 | SMART:SM00389 | SMART:SM01188 | SMART:SM01255 | SMART:SM01256 | EnsemblPlantsGene:SORBI_3004G067100 |
| SUPFAM:SSF46689 | UniParc:UPI000B424D59 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:5474973..5478493
Molecular Weight (calculated)
33124.1 Da
IEP (calculated)
6.246
GRAVY (calculated)
-0.490
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFHYPDHGL SMDAAAAAAA AAAAAAAASS PNPSGFSSPG VVGGEREKAA IAAHPLYERL LEAHVACLRV ATPVDQLPRI DAQIAARPPP LAAAAGAAAA
101: GGPSGGEELD LFMTHYVLLL CSFKEQLQQH VRVHAMEAVM GCWELEQSLQ SLTGASPGEG TGATMSDDED NQVDSEANMF DGNDGSDGMG FGPLILTEGE
201: RSLVERVRQE LKNELKQGYK EKLVDIREEI MRKRRAGKLP GDTASVLKAW WQAHSKWPYP TEDDKARLVQ ETGLQLKQIN NWFINQRKRN WHSNPTSSGE
301: KTKKKR
101: GGPSGGEELD LFMTHYVLLL CSFKEQLQQH VRVHAMEAVM GCWELEQSLQ SLTGASPGEG TGATMSDDED NQVDSEANMF DGNDGSDGMG FGPLILTEGE
201: RSLVERVRQE LKNELKQGYK EKLVDIREEI MRKRRAGKLP GDTASVLKAW WQAHSKWPYP TEDDKARLVQ ETGLQLKQIN NWFINQRKRN WHSNPTSSGE
301: KTKKKR
001: MAFHHNHLSQ DLSFNHFTDQ HQPPPPQPPP PPPQQQQHFQ EAPPPNWLNT ALLRSSDNNN NFLNLHTATA NTTTASSSDS PSSAAAAAAA NQWLSRSSSF
101: LQRNNNNNAS IVGDGIDDVT GGADTMIQGE MKTGGGENKN DGGGATAADG VVSWQNARHK AEILSHPLYE QLLSAHVACL RIATPVDQLP RIDAQLAQSQ
201: HVVAKYSALG AAAQGLVGDD KELDQFMTHY VLLLCSFKEQ LQQHVRVHAM EAVMACWEIE QSLQSLTGVS PGEGMGATMS DDEDEQVESD ANMFDGGLDV
301: LGFGPLIPTE SERSLMERVR QELKHELKQG YKEKIVDIRE EILRKRRAGK LPGDTTSVLK AWWQSHSKWP YPTEEDKARL VQETGLQLKQ INNWFINQRK
401: RNWHSNPSSS TVLKNKRKR
101: LQRNNNNNAS IVGDGIDDVT GGADTMIQGE MKTGGGENKN DGGGATAADG VVSWQNARHK AEILSHPLYE QLLSAHVACL RIATPVDQLP RIDAQLAQSQ
201: HVVAKYSALG AAAQGLVGDD KELDQFMTHY VLLLCSFKEQ LQQHVRVHAM EAVMACWEIE QSLQSLTGVS PGEGMGATMS DDEDEQVESD ANMFDGGLDV
301: LGFGPLIPTE SERSLMERVR QELKHELKQG YKEKIVDIRE EILRKRRAGK LPGDTTSVLK AWWQSHSKWP YPTEEDKARL VQETGLQLKQ INNWFINQRK
401: RNWHSNPSSS TVLKNKRKR
Arabidopsis Description
KNAT3KNAT3 [Source:UniProtKB/TrEMBL;Acc:A0A178U9D1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.