CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05245	Soybean	nucleus	90.53	90.75
TraesCS5B01G454600.1	Wheat	nucleus	36.65	85.8
TraesCS6D01G134800.1	Wheat	nucleus	39.81	79.23
KRH52385	Soybean	nucleus	73.3	75.88
KRH61712	Soybean	nucleus	72.82	72.99
Solyc08g041820.2.1	Tomato	nucleus	59.95	70.77
KRH03552	Soybean	nucleus	58.5	69.86
KRH20116	Soybean	nucleus	58.5	69.65
OQU84501	Sorghum	nucleus	51.7	69.61
KRH77464	Soybean	nucleus	47.33	69.39
KRH27981	Soybean	nucleus	46.84	69.18
TraesCS6B01G173900.1	Wheat	nucleus	49.76	68.79
PGSC0003DMT400040351	Potato	nucleus	60.92	68.77
TraesCS6A01G145500.1	Wheat	nucleus	50.97	68.63
KRH03996	Soybean	nucleus	48.3	68.15
Os02t0182800-01	Rice	nucleus	51.7	68.05
KRH57265	Soybean	nucleus	48.3	67.92
Zm00001d046568_P001	Maize	nucleus	51.94	67.72
KXG20488	Sorghum	nucleus	52.43	67.71
TraesCS7D01G501000.1	Wheat	nucleus	50.73	67.64
HORVU6Hr1G028610.2	Barley	nucleus	50.49	67.31
TraesCS1B01G135600.1	Wheat	nucleus	45.87	67.26
Os06t0646600-01	Rice	nucleus	52.67	67.18
KRH12889	Soybean	nucleus	59.47	66.22
Zm00001d053749_P002	Maize	nucleus	51.21	66.14
KRH37876	Soybean	nucleus	58.98	65.85
Zm00001d015549_P001	Maize	nucleus	51.7	65.54
KRG98594	Soybean	extracellular	12.86	64.63
TraesCS7B01G423100.2	Wheat	nucleus	50.73	62.39
HORVU7Hr1G114650.2	Barley	nucleus	47.82	60.99
TraesCS7A01G511800.2	Wheat	nucleus	50.49	52.0
KRG99390	Soybean	nucleus	11.89	37.4
KRH73380	Soybean	nucleus	5.34	33.85
KRH02013	Soybean	nucleus	20.15	30.86
KRH33819	Soybean	nucleus	22.09	30.74
KRH68434	Soybean	nucleus	21.84	29.32
KRH63561	Soybean	nucleus	19.17	28.42
KRG90534	Soybean	nucleus	21.12	28.34
KRG96717	Soybean	nucleus	21.36	28.3
KRH69600	Soybean	nucleus	20.87	27.92
KRH74562	Soybean	nucleus	20.63	27.51
KRH45633	Soybean	nucleus	20.15	25.86
KRH15482	Soybean	nucleus	23.54	25.19
KRG88661	Soybean	nucleus	23.3	24.81
KRH61471	Soybean	nucleus	21.36	24.38
KRH11492	Soybean	nucleus	22.09	24.27
KRH51140	Soybean	nucleus	21.12	24.03
KRH36506	Soybean	nucleus	21.84	23.75
KRH14756	Soybean	nucleus	18.45	23.38
KRH73381	Soybean	cytosol	11.41	20.43
KRG99387	Soybean	nucleus	8.01	17.19

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100812596	MapMan:15.5.3.4	EMBL:ACUP02008658	InterPro:ELK_dom	EnsemblPlantsGene:GLYMA_14G112400
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	UniProt:I1M9G1
InterPro:IPR001356	InterPro:IPR005539	InterPro:KNOX1	InterPro:KNOX2	EnsemblPlants:KRH15810	ProteinID:KRH15810
ProteinID:KRH15810.1	PFAM:PF03789	PFAM:PF03790	PFAM:PF03791	PFAM:PF05920	PFscan:PS50071
PFscan:PS51213	PANTHER:PTHR11850	PANTHER:PTHR11850:SF95	SMART:SM00389	SMART:SM01188	SMART:SM01255
SMART:SM01256	SUPFAM:SSF46689	UniParc:UPI00023D43D2	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr14:+:13098888..13103889

Molecular Weight (calculated)

45929.4 Da

IEP (calculated)

6.020

GRAVY (calculated)

-0.704

Length

412 amino acids

Sequence
(BLAST)

001: MAYHNHNLSQ QDLPLHHFPN QSILPDQQQQ LPSSPEPNSK PPSDLQTAPN WLNDALLRTH YTETTTNDAT TNTATVAAAA ANSNVNGSNF LNLNPGASDA
101: QWPALHRHPG EVIDAGAGDS MVEHADLKGG GGDGGGDAVN WQIGRWKAEI LQHPLYEQLL SAHVSCLRIA TPVDQLPRID AQLAQSQNVV AKYAAFGHNN
201: IVADDKELDQ FMSHYVLLLC SFKEQLQQHV RVHAMEAVMA CWDIEQSLQS LTGVSPGEGT GATMSDDEDD QVDSDANLFD SSFDGADGMG FGPLVPTESE
301: RSLMERVRQE LKHELKQGYK EKIVDIREEI LRKRRAGKLP GDTTSVLKAW WQSHSKWPYP TEEDKARLVQ ETGLQLKQIN NWFINQRKRN WHSNPSTSTV
401: LKSKRKRYSH QN

Best Arabidopsis Sequence Match ( AT5G25220.1 )
(BLAST)

001: MAFHHNHLSQ DLSFNHFTDQ HQPPPPQPPP PPPQQQQHFQ EAPPPNWLNT ALLRSSDNNN NFLNLHTATA NTTTASSSDS PSSAAAAAAA NQWLSRSSSF
101: LQRNNNNNAS IVGDGIDDVT GGADTMIQGE MKTGGGENKN DGGGATAADG VVSWQNARHK AEILSHPLYE QLLSAHVACL RIATPVDQLP RIDAQLAQSQ
201: HVVAKYSALG AAAQGLVGDD KELDQFMTHY VLLLCSFKEQ LQQHVRVHAM EAVMACWEIE QSLQSLTGVS PGEGMGATMS DDEDEQVESD ANMFDGGLDV
301: LGFGPLIPTE SERSLMERVR QELKHELKQG YKEKIVDIRE EILRKRRAGK LPGDTTSVLK AWWQSHSKWP YPTEEDKARL VQETGLQLKQ INNWFINQRK
401: RNWHSNPSSS TVLKNKRKSN AGDNSGRERF A

Arabidopsis Description

KNAT3KNAT3 [Source:UniProtKB/TrEMBL;Acc:A0A178U9D1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.