Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH03552 | Soybean | nucleus | 98.27 | 98.55 |
| Os08t0292900-01 | Rice | nucleus, plasma membrane | 50.29 | 82.46 |
| KRH12889 | Soybean | nucleus | 87.28 | 81.62 |
| KRH37876 | Soybean | nucleus | 86.71 | 81.3 |
| Solyc12g010410.1.1 | Tomato | nucleus | 63.01 | 66.26 |
| KRH77464 | Soybean | nucleus | 53.18 | 65.48 |
| GSMUA_Achr3P13370_001 | Banana | nucleus | 67.34 | 65.27 |
| PGSC0003DMT400020407 | Potato | nucleus | 63.87 | 65.0 |
| KRH27981 | Soybean | nucleus | 52.31 | 64.87 |
| KRH03996 | Soybean | nucleus | 53.76 | 63.7 |
| GSMUA_Achr7P05170_001 | Banana | nucleus | 72.25 | 63.61 |
| KRH57265 | Soybean | nucleus | 53.47 | 63.14 |
| GSMUA_Achr4P20400_001 | Banana | nucleus | 68.5 | 61.72 |
| GSMUA_Achr1P26000_001 | Banana | nucleus | 65.32 | 61.25 |
| KRG98594 | Soybean | extracellular | 14.45 | 60.98 |
| GSMUA_Achr10P... | Banana | nucleus | 67.92 | 59.95 |
| KRH52385 | Soybean | nucleus | 68.79 | 59.8 |
| VIT_11s0118g00800.t01 | Wine grape | nucleus | 74.28 | 59.77 |
| KRH05245 | Soybean | nucleus | 69.94 | 58.88 |
| KRH61712 | Soybean | nucleus | 69.94 | 58.88 |
| KRH15810 | Soybean | nucleus | 69.65 | 58.5 |
| PGSC0003DMT400078990 | Potato | nucleus | 69.08 | 57.59 |
| Solyc07g007120.2.1 | Tomato | nucleus | 70.52 | 56.61 |
| KRG99390 | Soybean | nucleus | 14.45 | 38.17 |
| KRH73380 | Soybean | nucleus | 6.65 | 35.38 |
| KRH33819 | Soybean | nucleus | 25.14 | 29.39 |
| KRH02013 | Soybean | nucleus | 22.83 | 29.37 |
| KRH68434 | Soybean | nucleus | 25.14 | 28.34 |
| KRG90534 | Soybean | nucleus | 24.86 | 28.01 |
| KRH63561 | Soybean | nucleus | 22.25 | 27.7 |
| KRG96717 | Soybean | nucleus | 24.86 | 27.65 |
| KRH69600 | Soybean | nucleus | 24.57 | 27.6 |
| KRH74562 | Soybean | nucleus | 24.57 | 27.51 |
| KRH45633 | Soybean | nucleus | 24.28 | 26.17 |
| KRH15482 | Soybean | nucleus | 26.88 | 24.16 |
| KRH61471 | Soybean | nucleus | 25.14 | 24.1 |
| KRG88661 | Soybean | nucleus | 26.59 | 23.77 |
| KRH51140 | Soybean | nucleus | 24.57 | 23.48 |
| KRH14756 | Soybean | nucleus | 21.68 | 23.08 |
| KRH11492 | Soybean | nucleus | 24.86 | 22.93 |
| KRH36506 | Soybean | nucleus | 24.28 | 22.16 |
| KRH73381 | Soybean | cytosol | 12.72 | 19.13 |
| KRG99387 | Soybean | nucleus | 9.83 | 17.71 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100803673 | MapMan:15.5.3.4 | EMBL:ACUP02008239 | InterPro:ELK_dom | EnsemblPlantsGene:GLYMA_13G157300 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | UniProt:I1LZN4 |
| InterPro:IPR001356 | InterPro:IPR005539 | InterPro:KNOX1 | InterPro:KNOX2 | EnsemblPlants:KRH20116 | ProteinID:KRH20116 |
| ProteinID:KRH20116.1 | PFAM:PF03789 | PFAM:PF03790 | PFAM:PF03791 | PFAM:PF05920 | PFscan:PS50071 |
| PFscan:PS51213 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF122 | SMART:SM00389 | SMART:SM01188 | SMART:SM01255 |
| SMART:SM01256 | SUPFAM:SSF46689 | UniParc:UPI00023CF3DB | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr13:+:27229673..27239008
Molecular Weight (calculated)
39799.4 Da
IEP (calculated)
5.756
GRAVY (calculated)
-0.881
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFHDHLQHE IGFQRFTEEQ ELNENRDMQQ RLPPPTWLNN VNVNARQQNF LDSEKSVDRN RSESNCESED LREYKADILG HPLYDQLLSA HVSCLRIATP
101: VDQLPRIDAQ LQQSQRVVEK YSALAHNGVV DEKELDQFMT HYVLLLCAFK EQLQQHVRVH AMEAVMACWD LEQSLQSLTG VSPGEGTGAT MSDDEDDQAE
201: SNANLYEGSL DGGETLGFGP LVPTESERSL MERVRHELKH ELKQGYKEKI VDIREEILRK RRAGKLPGDT TSLLKAWWQS HSKWPYPTEE DKARLVQETG
301: LQLKQINNWF INQRKRNWHT NNPSSSSNSK SKRKSSAGET SNQSFM
101: VDQLPRIDAQ LQQSQRVVEK YSALAHNGVV DEKELDQFMT HYVLLLCAFK EQLQQHVRVH AMEAVMACWD LEQSLQSLTG VSPGEGTGAT MSDDEDDQAE
201: SNANLYEGSL DGGETLGFGP LVPTESERSL MERVRHELKH ELKQGYKEKI VDIREEILRK RRAGKLPGDT TSLLKAWWQS HSKWPYPTEE DKARLVQETG
301: LQLKQINNWF INQRKRNWHT NNPSSSSNSK SKRKSSAGET SNQSFM
001: MSFNSSHLLP PQEDLPLRHF TDQSQQPPPQ RHFSETPSLV TASFLNLPTT LTTADSDLAP PHRNGDNSVA DTNPRWLSFH SEMQNTGEVR SEVIDGVNAD
101: GETILGVVGG EDWRSASYKA AILRHPMYEQ LLAAHVACLR VATPVDQIPR IDAQLSQLHT VAAKYSTLGV VVDNKELDHF MSHYVVLLCS FKEQLQHHVC
201: VHAMEAITAC WEIEQSLQSL TGVSPSESNG KTMSDDEDDN QVESEVNMFD GSLDGSDCLM GFGPLVPTER ERSLMERVKK ELKHELKQGF KEKIVDIREE
301: IMRKRRAGKL PGDTTSVLKE WWRTHSKWPY PTEEDKAKLV QETGLQLKQI NNWFINQRKR NWNSNSSTSS TLTKNKRKRT GKS
101: GETILGVVGG EDWRSASYKA AILRHPMYEQ LLAAHVACLR VATPVDQIPR IDAQLSQLHT VAAKYSTLGV VVDNKELDHF MSHYVVLLCS FKEQLQHHVC
201: VHAMEAITAC WEIEQSLQSL TGVSPSESNG KTMSDDEDDN QVESEVNMFD GSLDGSDCLM GFGPLVPTER ERSLMERVKK ELKHELKQGF KEKIVDIREE
301: IMRKRRAGKL PGDTTSVLKE WWRTHSKWPY PTEEDKAKLV QETGLQLKQI NNWFINQRKR NWNSNSSTSS TLTKNKRKRT GKS
Arabidopsis Description
KNAT5KNAT5 [Source:UniProtKB/TrEMBL;Acc:A0A178V1Z3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.