Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH68434 | Soybean | nucleus | 91.64 | 92.83 |
| KRG90534 | Soybean | nucleus | 66.56 | 67.43 |
| KRH33819 | Soybean | nucleus | 63.99 | 67.23 |
| VIT_14s0060g01180.t01 | Wine grape | nucleus | 60.77 | 60.97 |
| GSMUA_Achr2P00410_001 | Banana | nucleus | 53.38 | 54.43 |
| GSMUA_Achr8P10550_001 | Banana | nucleus | 53.7 | 54.4 |
| GSMUA_Achr11P... | Banana | nucleus | 53.7 | 54.22 |
| EES18954 | Sorghum | nucleus | 52.73 | 54.13 |
| Zm00001d010948_P001 | Maize | nucleus | 53.38 | 54.07 |
| Zm00001d035439_P001 | Maize | nucleus | 51.13 | 53.36 |
| EES00633 | Sorghum | nucleus | 50.16 | 53.06 |
| TraesCS1D01G075700.1 | Wheat | nucleus | 52.09 | 52.94 |
| TraesCS1B01G091700.1 | Wheat | nucleus | 52.09 | 52.94 |
| TraesCS1A01G072800.1 | Wheat | nucleus | 52.09 | 52.94 |
| HORVU1Hr1G015720.1 | Barley | nucleus | 52.09 | 52.94 |
| Os01t0302500-01 | Rice | nucleus | 51.13 | 52.82 |
| Os05t0129700-01 | Rice | nucleus | 52.09 | 52.09 |
| Zm00001d040611_P002 | Maize | nucleus | 48.87 | 51.53 |
| KRG99390 | Soybean | nucleus | 21.54 | 51.15 |
| PGSC0003DMT400007159 | Potato | nucleus | 52.73 | 50.93 |
| KRH73380 | Soybean | nucleus | 10.61 | 50.77 |
| TraesCS1D01G075600.1 | Wheat | nucleus | 49.2 | 50.0 |
| TraesCS1A01G072700.1 | Wheat | nucleus | 48.55 | 49.19 |
| TraesCS1B01G091600.1 | Wheat | nucleus | 47.59 | 48.21 |
| Solyc01g100510.2.1 | Tomato | nucleus | 51.45 | 47.76 |
| KRH63561 | Soybean | nucleus | 40.19 | 44.96 |
| KRH69600 | Soybean | nucleus | 42.44 | 42.86 |
| KRH02013 | Soybean | nucleus | 36.98 | 42.75 |
| KRH74562 | Soybean | nucleus | 42.44 | 42.72 |
| KRH45633 | Soybean | nucleus | 42.77 | 41.43 |
| KRH14756 | Soybean | nucleus | 37.62 | 36.0 |
| KRH61471 | Soybean | nucleus | 40.51 | 34.9 |
| KRG99387 | Soybean | nucleus | 21.22 | 34.38 |
| KRH11492 | Soybean | nucleus | 39.87 | 33.07 |
| KRH36506 | Soybean | nucleus | 40.19 | 32.98 |
| KRH51140 | Soybean | nucleus | 38.26 | 32.87 |
| KRG88661 | Soybean | nucleus | 40.19 | 32.3 |
| KRH15482 | Soybean | nucleus | 39.87 | 32.21 |
| KRH03996 | Soybean | nucleus | 27.97 | 29.79 |
| KRH27981 | Soybean | nucleus | 26.69 | 29.75 |
| KRH57265 | Soybean | nucleus | 27.65 | 29.35 |
| KRH77464 | Soybean | nucleus | 26.37 | 29.18 |
| KRH73381 | Soybean | cytosol | 19.61 | 26.52 |
| KRH03552 | Soybean | nucleus | 27.65 | 24.93 |
| KRH20116 | Soybean | nucleus | 27.65 | 24.86 |
| KRH12889 | Soybean | nucleus | 27.33 | 22.97 |
| KRH37876 | Soybean | nucleus | 27.01 | 22.76 |
| KRH05245 | Soybean | nucleus | 28.3 | 21.41 |
| KRH15810 | Soybean | nucleus | 28.3 | 21.36 |
| KRH61712 | Soybean | nucleus | 27.65 | 20.92 |
| KRH52385 | Soybean | nucleus | 26.69 | 20.85 |
| KRG98594 | Soybean | extracellular | 4.5 | 17.07 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100803095 | MapMan:15.5.3.4 | EMBL:ACUP02012162 | EMBL:BT095974 | UniProt:C6TEF2 |
| InterPro:ELK_dom | EnsemblPlantsGene:GLYMA_19G228300 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_CS | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR005539 | InterPro:KNOX1 |
| InterPro:KNOX2 | EnsemblPlants:KRG96717 | ProteinID:KRG96717 | ProteinID:KRG96717.1 | ProteinID:KRG96718.1 | PFAM:PF03789 |
| PFAM:PF03790 | PFAM:PF03791 | PFAM:PF05920 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS51213 |
| PANTHER:PTHR11850 | PANTHER:PTHR11850:SF102 | SMART:SM00389 | SMART:SM01188 | SMART:SM01255 | SMART:SM01256 |
| SUPFAM:SSF46689 | UniParc:UPI0001B16B5F | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr19:+:47976577..47982561
Molecular Weight (calculated)
35505.2 Da
IEP (calculated)
5.688
GRAVY (calculated)
-0.700
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAVYRLKPL LDVVRVGNAT TSEMRLESTA NCYLQLEAPQ PQENNNVTDS SSDMSDRIIK IQIANHPLYP DLLSAYIECQ KVGAPPELAC LLEEIGRESH
101: RMNARREIGE GPELDHFMET FCQVLHRYKE ELSRPFNEAT LFLGDMESQL SNLCNETLTK SSDNNNRSDE VASGASEEEL SCGEMEAFED NVSSVTCPSD
201: QRLKEMLLRK YSGHFSGLRK EFLKRRKKGK LPKDARMALM GWWNTHHRWP YPTEEEKVKL SEITGLDQKQ INNWFINQRK RHWKPTEDMR FAVMDGLRGG
301: GGGGIGGPML F
101: RMNARREIGE GPELDHFMET FCQVLHRYKE ELSRPFNEAT LFLGDMESQL SNLCNETLTK SSDNNNRSDE VASGASEEEL SCGEMEAFED NVSSVTCPSD
201: QRLKEMLLRK YSGHFSGLRK EFLKRRKKGK LPKDARMALM GWWNTHHRWP YPTEEEKVKL SEITGLDQKQ INNWFINQRK RHWKPTEDMR FAVMDGLRGG
301: GGGGIGGPML F
001: MDGMYNFHSA GDYSDKSVLM MSPESLMFPS DYQALLCSSA GENRVSDVFG SDELLSVAVS ALSSEAASIA PEIRRNDDNV SLTVIKAKIA CHPSYPRLLQ
101: AYIDCQKVGA PPEIACLLEE IQRESDVYKQ EVVPSSCFGA DPELDEFMET YCDILVKYKS DLARPFDEAT CFLNKIEMQL RNLCTGVESA RGVSEDGVIS
201: SDEELSGGDH EVAEDGRQRC EDRDLKDRLL RKFGSRISTL KLEFSKKKKK GKLPREARQA LLDWWNLHYK WPYPTEGDKI ALADATGLDQ KQINNWFINQ
301: RKRHWKPSEN MPFAMMDDSS GSFFTEE
101: AYIDCQKVGA PPEIACLLEE IQRESDVYKQ EVVPSSCFGA DPELDEFMET YCDILVKYKS DLARPFDEAT CFLNKIEMQL RNLCTGVESA RGVSEDGVIS
201: SDEELSGGDH EVAEDGRQRC EDRDLKDRLL RKFGSRISTL KLEFSKKKKK GKLPREARQA LLDWWNLHYK WPYPTEGDKI ALADATGLDQ KQINNWFINQ
301: RKRHWKPSEN MPFAMMDDSS GSFFTEE
Arabidopsis Description
KNAT6KNOTTED1-like homeobox gene 6 [Source:TAIR;Acc:AT1G23380]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.