CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73380	Soybean	nucleus	19.38	96.92
KRH02013	Soybean	nucleus	53.85	65.06
KRG99390	Soybean	nucleus	22.46	55.73
KRH51140	Soybean	nucleus	59.69	53.59
KRH11492	Soybean	nucleus	60.0	52.0
KRH36506	Soybean	nucleus	60.31	51.72
KRH73381	Soybean	cytosol	33.23	46.96
KRH33819	Soybean	nucleus	38.77	42.57
KRG90534	Soybean	nucleus	38.77	41.04
KRH69600	Soybean	nucleus	38.15	40.26
KRH63561	Soybean	nucleus	33.85	39.57
KRH45633	Soybean	nucleus	39.08	39.56
KRH74562	Soybean	nucleus	37.54	39.48
KRH61471	Soybean	nucleus	43.08	38.78
KRH68434	Soybean	nucleus	35.69	37.78
KRG96717	Soybean	nucleus	36.0	37.62
KRG88661	Soybean	nucleus	43.69	36.69
KRH15482	Soybean	nucleus	43.38	36.62
KRG99387	Soybean	nucleus	16.92	28.65
KRH27981	Soybean	nucleus	20.92	24.37
KRH03996	Soybean	nucleus	21.85	24.32
KRH57265	Soybean	nucleus	21.85	24.23
KRH77464	Soybean	nucleus	20.92	24.2
KRH20116	Soybean	nucleus	23.08	21.68
KRH03552	Soybean	nucleus	22.77	21.45
KRH37876	Soybean	nucleus	24.31	21.41
KRH12889	Soybean	nucleus	24.31	21.35
KRH52385	Soybean	nucleus	24.0	19.6
KRH61712	Soybean	nucleus	24.31	19.22
KRH15810	Soybean	nucleus	23.38	18.45
KRH05245	Soybean	nucleus	23.08	18.25
KRG98594	Soybean	extracellular	4.0	15.85

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100791704	MapMan:15.5.3.4	UniProt:A0A0R0GL54	EMBL:ACUP02008519	ProteinID:BAX25294.1
InterPro:ELK_dom	EnsemblPlantsGene:GLYMA_14G047000	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:Homeobox-like_sf
InterPro:Homeobox_CS	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR005539	InterPro:KNOX1
InterPro:KNOX2	EnsemblPlants:KRH14756	ProteinID:KRH14756	ProteinID:KRH14756.1	PFAM:PF03789	PFAM:PF03790
PFAM:PF03791	PFAM:PF05920	ScanProsite:PS00027	PFscan:PS50071	PFscan:PS51213	PANTHER:PTHR11850
PANTHER:PTHR11850:SF100	SMART:SM00389	SMART:SM01188	SMART:SM01255	SMART:SM01256	SUPFAM:SSF46689
UniParc:UPI000233ACDE	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:+:3580099..3584268

Molecular Weight (calculated)

37174.1 Da

IEP (calculated)

6.708

GRAVY (calculated)

-0.708

Length

325 amino acids

Sequence
(BLAST)

001: MIGFGGNSCS ELSEMDMMNM ETNNRKFLSL PLSNNNNNSG NAQMRSSSDN RRVPVTSNSN IAQEHHYSHH NPTDTCSVRD KIMAHPLFPR LLSSYLNCLK
101: VGAPPEVVAS LEESCAKCES FNASSGRTGG SIGEDPALDQ FMEAYCEMLI KYEQELTKPF KEAMLFFSRI ECQLKALAVS SDFGQSETSS QNEVDVHENN
201: LDSQAEDREL KVQLLRKYSG YLGSLKKEFL KKKKNGKLPK EARQQLLDWW NRHYKWPYPS ESQKQALAES TGLDLKQINN WFINQRKRHW KPSEDMQFAV
301: MDATNYYMEN VMCKPFPMDG MPMLL

Best Arabidopsis Sequence Match ( AT1G23380.1 )
(BLAST)

001: MDGMYNFHSA GDYSDKSVLM MSPESLMFPS DYQALLCSSA GENRVSDVFG SDELLSVAVS ALSSEAASIA PEIRRNDDNV SLTVIKAKIA CHPSYPRLLQ
101: AYIDCQKVGA PPEIACLLEE IQRESDVYKQ EVVPSSCFGA DPELDEFMET YCDILVKYKS DLARPFDEAT CFLNKIEMQL RNLCTGVESA RGVSEDGVIS
201: SDEELSGGDH EVAEDGRQRC EDRDLKDRLL RKFGSRISTL KLEFSKKKKK GKLPREARQA LLDWWNLHYK WPYPTEGDKI ALADATGLDQ KQINNWFINQ
301: RKRHWKPSEN MPFAMMDDSS GSFFTEE

Arabidopsis Description

KNAT6KNOTTED1-like homeobox gene 6 [Source:TAIR;Acc:AT1G23380]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.