Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG99390 | Soybean | nucleus | 47.69 | 23.66 |
| KRH14756 | Soybean | nucleus | 96.92 | 19.38 |
| KRH02013 | Soybean | nucleus | 75.38 | 18.22 |
| KRH51140 | Soybean | nucleus | 76.92 | 13.81 |
| KRH11492 | Soybean | nucleus | 76.92 | 13.33 |
| KRH36506 | Soybean | nucleus | 76.92 | 13.19 |
| KRH61471 | Soybean | nucleus | 63.08 | 11.36 |
| GSMUA_Achr8P05110_001 | Banana | nucleus | 53.85 | 11.33 |
| KRH33819 | Soybean | nucleus | 50.77 | 11.15 |
| KRH15482 | Soybean | nucleus | 64.62 | 10.91 |
| KRG88661 | Soybean | nucleus | 64.62 | 10.85 |
| KRG96717 | Soybean | nucleus | 50.77 | 10.61 |
| KRG90534 | Soybean | nucleus | 49.23 | 10.42 |
| KRH69600 | Soybean | nucleus | 49.23 | 10.39 |
| KRH74562 | Soybean | nucleus | 49.23 | 10.36 |
| KRH68434 | Soybean | nucleus | 47.69 | 10.1 |
| KRH63561 | Soybean | nucleus | 43.08 | 10.07 |
| KRH45633 | Soybean | nucleus | 49.23 | 9.97 |
| KRH27981 | Soybean | nucleus | 32.31 | 7.53 |
| KRH77464 | Soybean | nucleus | 32.31 | 7.47 |
| KRH03996 | Soybean | nucleus | 32.31 | 7.19 |
| KRH57265 | Soybean | nucleus | 32.31 | 7.17 |
| KRH03552 | Soybean | nucleus | 35.38 | 6.67 |
| KRH20116 | Soybean | nucleus | 35.38 | 6.65 |
| KRH37876 | Soybean | nucleus | 35.38 | 6.23 |
| KRH12889 | Soybean | nucleus | 35.38 | 6.22 |
| KRH52385 | Soybean | nucleus | 33.85 | 5.53 |
| KRH61712 | Soybean | nucleus | 33.85 | 5.35 |
| KRH05245 | Soybean | nucleus | 33.85 | 5.35 |
| KRH15810 | Soybean | nucleus | 33.85 | 5.34 |
| KRH73381 | Soybean | cytosol | 9.23 | 2.61 |
| KRG98594 | Soybean | extracellular | 3.08 | 2.44 |
| KRG99387 | Soybean | nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.1 | UniProt:A0A0R0LBP4 | EMBL:ACUP02001273 | EnsemblPlantsGene:GLYMA_02G2699002 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom |
| InterPro:IPR001356 | EnsemblPlants:KRH73380 | ProteinID:KRH73380 | ProteinID:KRH73380.1 | PFAM:PF05920 | ScanProsite:PS00027 |
| PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF100 | SUPFAM:SSF46689 | UniParc:UPI0006EDE514 | : |
Description
hypothetical protein
Coordinates
chr2:-:45400393..45400590
Molecular Weight (calculated)
7747.4 Da
IEP (calculated)
5.744
GRAVY (calculated)
-0.686
Length
65 amino acids
Sequence
(BLAST)
(BLAST)
1: ESQKQALAES TGLDMKQINN WFINQRKRHW KPSEDMQFAV MDATNYYMEN VMCKPFPMDS MPMLL
001: MESGSNSTSC PMAFAGDNSD GPMCPMMMMM PPIMTSHQHH GHDHQHQQQE HDGYAYQSHH QQSSSLFLQS LAPPQGTKNK VASSSSPSSC APAYSLMEIH
101: HNEIVAGGIN PCSSSSSSAS VKAKIMAHPH YHRLLAAYVN CQKVGAPPEV VARLEEACSS AAAAAASMGP TGCLGEDPGL DQFMEAYCEM LVKYEQELSK
201: PFKEAMVFLQ RVECQFKSLS LSSPSSFSGY GETAIDRNNN GSSEEEVDMN NEFVDPQAED RELKGQLLRK YSGYLGSLKQ EFMKKRKKGK LPKEARQQLL
301: DWWSRHYKWP YPSEQQKLAL AESTGLDQKQ INNWFINQRK RHWKPSEDMQ FVVMDATHPH HYFMDNVLGN PFPMDHISST ML
101: HNEIVAGGIN PCSSSSSSAS VKAKIMAHPH YHRLLAAYVN CQKVGAPPEV VARLEEACSS AAAAAASMGP TGCLGEDPGL DQFMEAYCEM LVKYEQELSK
201: PFKEAMVFLQ RVECQFKSLS LSSPSSFSGY GETAIDRNNN GSSEEEVDMN NEFVDPQAED RELKGQLLRK YSGYLGSLKQ EFMKKRKKGK LPKEARQQLL
301: DWWSRHYKWP YPSEQQKLAL AESTGLDQKQ INNWFINQRK RHWKPSEDMQ FVVMDATHPH HYFMDNVLGN PFPMDHISST ML
Arabidopsis Description
STMHomeobox protein SHOOT MERISTEMLESS [Source:UniProtKB/Swiss-Prot;Acc:Q38874]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.