Factsheet for GSMUA_Achr8P05110_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73380	Soybean	nucleus	11.33	53.85
GSMUA_Achr5P01960_001	Banana	nucleus	27.18	43.75
GSMUA_Achr4P28270_001	Banana	nucleus	38.19	43.54
GSMUA_Achr7P08050_001	Banana	nucleus	36.89	42.86
GSMUA_Achr3P26230_001	Banana	nucleus	43.69	41.93
GSMUA_Achr7P27540_001	Banana	nucleus	45.31	40.0
GSMUA_Achr4P03120_001	Banana	nucleus	36.25	38.62
GSMUA_Achr4P32230_001	Banana	nucleus	40.45	36.23
GSMUA_Achr10P...	Banana	nucleus	30.1	35.77
GSMUA_Achr2P13200_001	Banana	nucleus	40.13	35.33
GSMUA_Achr4P14600_001	Banana	nucleus	41.75	33.25
GSMUA_Achr6P04640_001	Banana	nucleus	38.19	33.05
GSMUA_Achr11P...	Banana	nucleus	30.42	30.52
GSMUA_Achr8P10550_001	Banana	nucleus	29.77	29.97
GSMUA_Achr2P00410_001	Banana	nucleus	29.13	29.51
GSMUA_Achr3P13370_001	Banana	nucleus	20.39	17.65
GSMUA_Achr1P03660_001	Banana	nucleus	16.18	17.18
GSMUA_Achr5P04420_001	Banana	nucleus	13.92	17.13
GSMUA_Achr10P...	Banana	nucleus	21.36	16.84
GSMUA_Achr1P26000_001	Banana	nucleus	20.06	16.8
GSMUA_Achr7P05170_001	Banana	nucleus	20.71	16.29
GSMUA_Achr4P20400_001	Banana	nucleus	20.06	16.15

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.4	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr8G05110_001	EnsemblPlants:GSMUA_Achr8P05110_001
EnsemblPlants:GSMUA_Achr8T05110_001	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:KNOX1
InterPro:KNOX2	UniProt:M0TMR4	PFAM:PF03790	PFAM:PF03791	PFAM:PF05920	PFscan:PS50071
PANTHER:PTHR11850	PANTHER:PTHR11850:SF203	SMART:SM01255	SMART:SM01256	SUPFAM:SSF46689	UniParc:UPI00029582C8

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G05110_001]

Coordinates

chr8:+:3351270..3353984

Molecular Weight (calculated)

34828.1 Da

IEP (calculated)

4.583

GRAVY (calculated)

-0.380

Length

309 amino acids

Sequence
(BLAST)

001: MEEFPSREAI RGEVCCSPLP LRPDKVAAAD AMVATPSTAY CNPINSFLIS DHHENPNLLQ PKPQGASTSR IPQGDDHAIK AKIISHPQCS SLVSAYVECQ
101: KEHIISMVAS RLSAVAQEFD MRLRASLICR DAAPDSELDQ FMEACHDMLV KYEEELSRPL QEAMAFLRSV ESQLNSISVD GGSLPITSNV YRCVFSLVWL
201: PEEKPRAEAS SSDEVWWMLE QPPARALGEE EEDWWELHYK WPYPSLAEST GLDMKQIDNW FINQRKRHWK PSEEMQFVVM DGFQGPSAAA ASLYMDGHFN
301: GDGLYRLGF

Best Arabidopsis Sequence Match ( AT4G08150.1 )
(BLAST)

001: MEEYQHDNST TPQRVSFLYS PISSSNKNDN TSDTNNNNNN NNSSNYGPGY NNTNNNNHHH QHMLFPHMSS LLPQTTENCF RSDHDQPNNN NNPSVKSEAS
101: SSRINHYSML MRAIHNTQEA NNNNNDNVSD VEAMKAKIIA HPHYSTLLQA YLDCQKIGAP PDVVDRITAA RQDFEARQQR STPSVSASSR DPELDQFMEA
201: YCDMLVKYRE ELTRPIQEAM EFIRRIESQL SMLCQSPIHI LNNPDGKSDN MGSSDEEQEN NSGGETELPE IDPRAEDREL KNHLLKKYSG YLSSLKQELS
301: KKKKKGKLPK EARQKLLTWW ELHYKWPYPS ESEKVALAES TGLDQKQINN WFINQRKRHW KPSEDMQFMV MDGLQHPHHA ALYMDGHYMG DGPYRLGP

Arabidopsis Description

KNAT1Homeobox protein knotted-1-like 1 [Source:UniProtKB/Swiss-Prot;Acc:P46639]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.