Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P05170_001 | Banana | nucleus | 86.55 | 78.63 |
| GSMUA_Achr1P26000_001 | Banana | nucleus | 80.11 | 77.51 |
| GSMUA_Achr4P20400_001 | Banana | nucleus | 78.99 | 73.44 |
| GSMUA_Achr10P... | Banana | nucleus | 76.19 | 69.39 |
| GSMUA_Achr5P04420_001 | Banana | nucleus | 47.62 | 67.73 |
| KRH03552 | Soybean | nucleus | 65.27 | 67.54 |
| KRH20116 | Soybean | nucleus | 65.27 | 67.34 |
| KRH37876 | Soybean | nucleus | 67.79 | 65.58 |
| KRH12889 | Soybean | nucleus | 67.79 | 65.41 |
| Solyc12g010410.1.1 | Tomato | nucleus | 59.1 | 64.13 |
| VIT_11s0118g00800.t01 | Wine grape | nucleus | 76.47 | 63.49 |
| PGSC0003DMT400020407 | Potato | nucleus | 59.1 | 62.06 |
| PGSC0003DMT400078990 | Potato | nucleus | 71.71 | 61.69 |
| GSMUA_Achr1P03660_001 | Banana | nucleus | 49.86 | 61.17 |
| Solyc07g007120.2.1 | Tomato | nucleus | 71.71 | 59.4 |
| GSMUA_Achr7P08050_001 | Banana | nucleus | 22.97 | 30.83 |
| GSMUA_Achr5P01960_001 | Banana | nucleus | 16.53 | 30.73 |
| GSMUA_Achr4P28270_001 | Banana | nucleus | 22.97 | 30.26 |
| GSMUA_Achr8P10550_001 | Banana | nucleus | 25.49 | 29.64 |
| GSMUA_Achr10P... | Banana | nucleus | 21.57 | 29.62 |
| GSMUA_Achr2P00410_001 | Banana | nucleus | 24.65 | 28.85 |
| GSMUA_Achr11P... | Banana | nucleus | 24.65 | 28.57 |
| GSMUA_Achr7P27540_001 | Banana | nucleus | 26.61 | 27.14 |
| GSMUA_Achr4P03120_001 | Banana | nucleus | 21.85 | 26.9 |
| GSMUA_Achr3P26230_001 | Banana | nucleus | 23.81 | 26.4 |
| GSMUA_Achr4P32230_001 | Banana | nucleus | 24.65 | 25.51 |
| GSMUA_Achr2P13200_001 | Banana | nucleus | 24.09 | 24.5 |
| GSMUA_Achr6P04640_001 | Banana | nucleus | 23.53 | 23.53 |
| GSMUA_Achr4P14600_001 | Banana | nucleus | 25.49 | 23.45 |
| GSMUA_Achr8P05110_001 | Banana | nucleus | 17.65 | 20.39 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.4 | InterPro:ELK_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr3G13370_001 |
| EnsemblPlants:GSMUA_Achr3P13370_001 | EnsemblPlants:GSMUA_Achr3T13370_001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR005539 | InterPro:KNOX1 | InterPro:KNOX2 | UniProt:M0SEA4 | PFAM:PF03789 | PFAM:PF03790 |
| PFAM:PF03791 | PFAM:PF05920 | PFscan:PS50071 | PFscan:PS51213 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF122 |
| SMART:SM00389 | SMART:SM01188 | SMART:SM01255 | SMART:SM01256 | SUPFAM:SSF46689 | UniParc:UPI0002953668 |
| SEG:seg | : | : | : | : | : |
Description
homeobox protein knotted-1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G13370_001]
Coordinates
chr3:-:9822084..9825432
Molecular Weight (calculated)
39809.8 Da
IEP (calculated)
6.513
GRAVY (calculated)
-0.573
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGGGGPTWL NSAILRQQAH HYADGSFLHL QTTSDSSASP VPVSSQSAEA VAQGGGTGGE GTWQNARYKA EILAHPLYEQ LLAAHVACLR IATPVDQLPR
101: IDAQLAQSQQ VVSKYSVLGN SGQLLGDDKE LDQFMTHYVL LLCSFKEQLQ QHVRVHAMEA VMACWELEQS LQSLTGVSPG EGTGATMSDD DEDDQADSET
201: NLFDGGFDGT DSMGFGPLIP TESERSLMER VRQELKHELK QGYKEKIVDI REEILRKRRA GKLPGDSTSM LKAWWQSHSK WPYPTEDDKA RLVQETGLQL
301: KQINNWFINQ RKRNWHSNAS SSSSLKTKRK RFAIHRCSKA FLSFLPTSSF YLELKTE
101: IDAQLAQSQQ VVSKYSVLGN SGQLLGDDKE LDQFMTHYVL LLCSFKEQLQ QHVRVHAMEA VMACWELEQS LQSLTGVSPG EGTGATMSDD DEDDQADSET
201: NLFDGGFDGT DSMGFGPLIP TESERSLMER VRQELKHELK QGYKEKIVDI REEILRKRRA GKLPGDSTSM LKAWWQSHSK WPYPTEDDKA RLVQETGLQL
301: KQINNWFINQ RKRNWHSNAS SSSSLKTKRK RFAIHRCSKA FLSFLPTSSF YLELKTE
001: MAFHHNHLSQ DLSFNHFTDQ HQPPPPQPPP PPPQQQQHFQ EAPPPNWLNT ALLRSSDNNN NFLNLHTATA NTTTASSSDS PSSAAAAAAA NQWLSRSSSF
101: LQRNNNNNAS IVGDGIDDVT GGADTMIQGE MKTGGGENKN DGGGATAADG VVSWQNARHK AEILSHPLYE QLLSAHVACL RIATPVDQLP RIDAQLAQSQ
201: HVVAKYSALG AAAQGLVGDD KELDQFMTHY VLLLCSFKEQ LQQHVRVHAM EAVMACWEIE QSLQSLTGVS PGEGMGATMS DDEDEQVESD ANMFDGGLDV
301: LGFGPLIPTE SERSLMERVR QELKHELKQG YKEKIVDIRE EILRKRRAGK LPGDTTSVLK AWWQSHSKWP YPTEEDKARL VQETGLQLKQ INNWFINQRK
401: RNWHSNPSSS TVLKNKRKR
101: LQRNNNNNAS IVGDGIDDVT GGADTMIQGE MKTGGGENKN DGGGATAADG VVSWQNARHK AEILSHPLYE QLLSAHVACL RIATPVDQLP RIDAQLAQSQ
201: HVVAKYSALG AAAQGLVGDD KELDQFMTHY VLLLCSFKEQ LQQHVRVHAM EAVMACWEIE QSLQSLTGVS PGEGMGATMS DDEDEQVESD ANMFDGGLDV
301: LGFGPLIPTE SERSLMERVR QELKHELKQG YKEKIVDIRE EILRKRRAGK LPGDTTSVLK AWWQSHSKWP YPTEEDKARL VQETGLQLKQ INNWFINQRK
401: RNWHSNPSSS TVLKNKRKR
Arabidopsis Description
KNAT3KNAT3 [Source:UniProtKB/TrEMBL;Acc:A0A178U9D1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.