Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 84.36 | 84.09 |
| GSMUA_Achr2P00410_001 | Banana | nucleus | 79.48 | 80.0 |
| EES00633 | Sorghum | nucleus | 65.47 | 68.37 |
| Os01t0302500-01 | Rice | nucleus | 66.78 | 68.11 |
| TraesCS1D01G075700.1 | Wheat | nucleus | 67.1 | 67.32 |
| TraesCS1B01G091700.1 | Wheat | nucleus | 67.1 | 67.32 |
| TraesCS1A01G072800.1 | Wheat | nucleus | 67.1 | 67.32 |
| HORVU1Hr1G015720.1 | Barley | nucleus | 67.1 | 67.32 |
| Zm00001d040611_P002 | Maize | nucleus | 64.5 | 67.12 |
| EES18954 | Sorghum | nucleus | 66.12 | 67.0 |
| Zm00001d010948_P001 | Maize | nucleus | 66.12 | 66.12 |
| Os05t0129700-01 | Rice | nucleus | 66.45 | 65.59 |
| Zm00001d035439_P001 | Maize | nucleus | 63.52 | 65.44 |
| TraesCS1D01G075600.1 | Wheat | nucleus | 61.24 | 61.44 |
| VIT_14s0060g01180.t01 | Wine grape | nucleus | 61.56 | 60.97 |
| TraesCS1B01G091600.1 | Wheat | nucleus | 60.26 | 60.26 |
| KRH33819 | Soybean | nucleus | 57.98 | 60.14 |
| TraesCS1A01G072700.1 | Wheat | nucleus | 59.61 | 59.61 |
| KRG90534 | Soybean | nucleus | 57.0 | 57.0 |
| KRG96717 | Soybean | nucleus | 54.4 | 53.7 |
| PGSC0003DMT400007159 | Potato | nucleus | 55.7 | 53.11 |
| KRH68434 | Soybean | nucleus | 53.09 | 53.09 |
| Solyc01g100510.2.1 | Tomato | nucleus | 56.03 | 51.34 |
| GSMUA_Achr5P01960_001 | Banana | nucleus | 30.94 | 49.48 |
| GSMUA_Achr7P08050_001 | Banana | nucleus | 41.37 | 47.74 |
| GSMUA_Achr4P28270_001 | Banana | nucleus | 40.39 | 45.76 |
| GSMUA_Achr10P... | Banana | nucleus | 36.16 | 42.69 |
| GSMUA_Achr2P13200_001 | Banana | nucleus | 44.3 | 38.75 |
| GSMUA_Achr4P03120_001 | Banana | nucleus | 36.48 | 38.62 |
| GSMUA_Achr3P26230_001 | Banana | nucleus | 39.74 | 37.89 |
| GSMUA_Achr6P04640_001 | Banana | nucleus | 43.97 | 37.82 |
| GSMUA_Achr7P27540_001 | Banana | nucleus | 43.0 | 37.71 |
| GSMUA_Achr4P32230_001 | Banana | nucleus | 41.69 | 37.1 |
| GSMUA_Achr4P14600_001 | Banana | nucleus | 41.37 | 32.73 |
| GSMUA_Achr8P05110_001 | Banana | nucleus | 29.97 | 29.77 |
| GSMUA_Achr1P03660_001 | Banana | nucleus | 27.69 | 29.21 |
| GSMUA_Achr5P04420_001 | Banana | nucleus | 23.78 | 29.08 |
| GSMUA_Achr3P13370_001 | Banana | nucleus | 29.64 | 25.49 |
| GSMUA_Achr1P26000_001 | Banana | nucleus | 30.62 | 25.47 |
| GSMUA_Achr4P20400_001 | Banana | nucleus | 31.6 | 25.26 |
| GSMUA_Achr7P05170_001 | Banana | nucleus | 32.25 | 25.19 |
| GSMUA_Achr10P... | Banana | nucleus | 31.6 | 24.74 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.4 | InterPro:ELK_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSMUA_Achr8G10550_001 | EnsemblPlants:GSMUA_Achr8P10550_001 | EnsemblPlants:GSMUA_Achr8T10550_001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_KN_domain |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR005539 | InterPro:KNOX1 | InterPro:KNOX2 | UniProt:M0TPA8 |
| PFAM:PF03789 | PFAM:PF03790 | PFAM:PF03791 | PFAM:PF05920 | ScanProsite:PS00027 | PFscan:PS50071 |
| PFscan:PS51213 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF102 | SMART:SM00389 | SMART:SM01188 | SMART:SM01255 |
| SMART:SM01256 | SUPFAM:SSF46689 | UniParc:UPI000294AEF5 | SEG:seg | : | : |
Description
Homeobox protein knotted-1-like 1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G10550_001]
Coordinates
chr8:-:7541063..7546079
Molecular Weight (calculated)
33852.8 Da
IEP (calculated)
4.865
GRAVY (calculated)
-0.559
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDLYSIHPG ILRGGDTPAV GSASSCQGSS DASEVTGSSG GVSDLTDLIK AQIANHPRYP TLLSAYIECR KVGAPPEVAT LLEEIGKESY SSVGGGEIGA
101: DPELDEFMES YCHVLVRYKE ELLKPFDEAA SFLNHIEMQL TDLCKGPSTA PTASAATGNS PSEEVIGSSD EELSCGDLET LEGQECGSRM ADHELKQMLL
201: TKYSGYLSNL RKEFLKKRKK GKLPKDARLT LLDWWNSHCR WPYPTEEEKA KLAEKTGLNQ KQINNWFINQ RKRHWKPSED MRFALMEEVS GGSSRTMLYF
301: DSGTIGP
101: DPELDEFMES YCHVLVRYKE ELLKPFDEAA SFLNHIEMQL TDLCKGPSTA PTASAATGNS PSEEVIGSSD EELSCGDLET LEGQECGSRM ADHELKQMLL
201: TKYSGYLSNL RKEFLKKRKK GKLPKDARLT LLDWWNSHCR WPYPTEEEKA KLAEKTGLNQ KQINNWFINQ RKRHWKPSED MRFALMEEVS GGSSRTMLYF
301: DSGTIGP
001: MDGMYNFHSA GDYSDKSVLM MSPESLMFPS DYQALLCSSA GENRVSDVFG SDELLSVAVS ALSSEAASIA PEIRRNDDNV SLTVIKAKIA CHPSYPRLLQ
101: AYIDCQKVGA PPEIACLLEE IQRESDVYKQ EVVPSSCFGA DPELDEFMET YCDILVKYKS DLARPFDEAT CFLNKIEMQL RNLCTGVESA RGVSEDGVIS
201: SDEELSGGDH EVAEDGRQRC EDRDLKDRLL RKFGSRISTL KLEFSKKKKK GKLPREARQA LLDWWNLHYK WPYPTEGDKI ALADATGLDQ KQINNWFINQ
301: RKRHWKPSEN MPFAMMDDSS GSFFTEE
101: AYIDCQKVGA PPEIACLLEE IQRESDVYKQ EVVPSSCFGA DPELDEFMET YCDILVKYKS DLARPFDEAT CFLNKIEMQL RNLCTGVESA RGVSEDGVIS
201: SDEELSGGDH EVAEDGRQRC EDRDLKDRLL RKFGSRISTL KLEFSKKKKK GKLPREARQA LLDWWNLHYK WPYPTEGDKI ALADATGLDQ KQINNWFINQ
301: RKRHWKPSEN MPFAMMDDSS GSFFTEE
Arabidopsis Description
KNAT6KNOTTED1-like homeobox gene 6 [Source:TAIR;Acc:AT1G23380]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.