Factsheet for Os01t0302500-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00633	Sorghum	nucleus	85.05	87.07
Zm00001d040611_P002	Maize	nucleus	83.39	85.08
Os05t0129700-01	Rice	nucleus	80.07	77.49
Os03t0673000-00	Rice	nucleus	17.61	68.83
GSMUA_Achr11P...	Banana	nucleus	69.44	67.86
GSMUA_Achr8P10550_001	Banana	nucleus	68.11	66.78
GSMUA_Achr2P00410_001	Banana	nucleus	65.12	64.26
VIT_14s0060g01180.t01	Wine grape	nucleus	58.8	57.1
KRH33819	Soybean	nucleus	55.81	56.76
KRG90534	Soybean	nucleus	56.15	55.05
KRH68434	Soybean	nucleus	52.16	51.14
KRG96717	Soybean	nucleus	52.82	51.13
PGSC0003DMT400007159	Potato	nucleus	53.82	50.31
Solyc01g100510.2.1	Tomato	nucleus	54.49	48.96
Os07t0129700-01	Rice	nucleus	45.85	38.87
Os03t0727000-02	Rice	nucleus	42.86	35.73
Os03t0771500-01	Rice	nucleus	39.53	35.42
Os08t0292900-01	Rice	nucleus, plasma membrane	23.26	33.18
Os03t0727200-00	Rice	nucleus	40.2	33.15
Os02t0182800-01	Rice	nucleus	31.89	30.67
Os03t0673500-00	Rice	nucleus	34.55	30.23
Os06t0646600-01	Rice	nucleus	31.56	29.41
Os03t0123500-02	Rice	nucleus	26.58	25.48
Os03t0772100-00	Rice	vacuole	34.22	24.76

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.4	EntrezGene:4325788	EMBL:AB007626	EMBL:AB028883	ProteinID:BAB19772.1
ProteinID:BAB93157.1	ProteinID:BAF04741.1	ProteinID:BAS71730.1	InterPro:ELK_dom	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356
InterPro:IPR005539	InterPro:KNOX1	InterPro:KNOX2	EnsemblPlantsGene:Os01g0302500	EnsemblPlants:Os01t0302500-01	PFAM:PF03789
PFAM:PF03790	PFAM:PF03791	PFAM:PF05920	ScanProsite:PS00027	PFscan:PS50071	PFscan:PS51213
PANTHER:PTHR11850	PANTHER:PTHR11850:SF115	UniProt:Q9FP29	SMART:SM00389	SMART:SM01188	SMART:SM01255
SMART:SM01256	SUPFAM:SSF46689	UniParc:UPI00000ABDD3	RefSeq:XP_015634297.1	SEG:seg	:

Description

HOMEOBOX 6Knotted1-type homeobox protein OSH6. (Os01t0302500-01)

Coordinates

chr1:+:11167043..11174451

Molecular Weight (calculated)

32737.7 Da

IEP (calculated)

6.519

GRAVY (calculated)

-0.513

Length

301 amino acids

Sequence
(BLAST)

001: MEDLYSIHPG ISRVGGAASE ASGVGVVVGG GGGSSSSDLT ELMKAQIAGH PRYPTLLSAY IECRKVGAPP EVASLLKEIG RERRAGGGGG GAGQIGVDPE
101: LDEFMEAYCR VLVRYKEELS RPFDEAASFL SSIQTQLSNL CSGATSPPAT TATHSDEMVG SSDEDQCSGE TDMLDIGQEQ SSRLADHELK EMLLKKYSGC
201: LSRLRSEFLK KRKKGKLPKD ARSALLEWWN THYRWPYPTE EDKLRLAART GLDPKQINNW FINQRKRHWK PSDGMRFALM EGVAGGSSGT TLYFDTGTIG
301: P

Best Arabidopsis Sequence Match ( AT1G23380.1 )
(BLAST)

001: MDGMYNFHSA GDYSDKSVLM MSPESLMFPS DYQALLCSSA GENRVSDVFG SDELLSVAVS ALSSEAASIA PEIRRNDDNV SLTVIKAKIA CHPSYPRLLQ
101: AYIDCQKVGA PPEIACLLEE IQRESDVYKQ EVVPSSCFGA DPELDEFMET YCDILVKYKS DLARPFDEAT CFLNKIEMQL RNLCTGVESA RGVSEDGVIS
201: SDEELSGGDH EVAEDGRQRC EDRDLKDRLL RKFGSRISTL KLEFSKKKKK GKLPREARQA LLDWWNLHYK WPYPTEGDKI ALADATGLDQ KQINNWFINQ
301: RKRHWKPSEN MPFAMMDDSS GSFFTEE

Arabidopsis Description

KNAT6KNOTTED1-like homeobox gene 6 [Source:TAIR;Acc:AT1G23380]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.