Factsheet for Os05t0129700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

cytosol: 15604716
nucleus: 15604716

gfp PMID: 15604716 doi

SJ Kuijt, GE Lamers, S Rueb, E Scarpella, PB Ouwerkerk, HP Spaink, AH Meijer

Institute of Biology, Leiden University, Wassenaarseweg 64, 2333 AL, Leiden, the Netherlands.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18954	Sorghum	nucleus	85.85	88.12
TraesCS1D01G075700.1	Wheat	nucleus	86.17	87.58
HORVU1Hr1G015720.1	Barley	nucleus	85.85	87.25
TraesCS1B01G091700.1	Wheat	nucleus	85.85	87.25
TraesCS1A01G072800.1	Wheat	nucleus	85.53	86.93
Zm00001d035439_P001	Maize	nucleus	81.99	85.57
Zm00001d010948_P001	Maize	nucleus	83.92	85.02
Os01t0302500-01	Rice	nucleus	77.49	80.07
TraesCS1D01G075600.1	Wheat	nucleus	76.53	77.78
TraesCS1A01G072700.1	Wheat	nucleus	75.24	76.22
TraesCS1B01G091600.1	Wheat	nucleus	74.92	75.9
Os03t0673000-00	Rice	nucleus	16.72	67.53
GSMUA_Achr11P...	Banana	nucleus	65.92	66.56
GSMUA_Achr8P10550_001	Banana	nucleus	65.59	66.45
GSMUA_Achr2P00410_001	Banana	nucleus	63.99	65.25
KRH33819	Soybean	nucleus	53.38	56.08
VIT_14s0060g01180.t01	Wine grape	nucleus	55.31	55.48
KRG90534	Soybean	nucleus	54.02	54.72
KRG96717	Soybean	nucleus	52.09	52.09
KRH68434	Soybean	nucleus	51.13	51.79
PGSC0003DMT400007159	Potato	nucleus	53.05	51.24
Solyc01g100510.2.1	Tomato	nucleus	53.38	49.55
Os07t0129700-01	Rice	nucleus	44.37	38.87
Os08t0292900-01	Rice	nucleus, plasma membrane	24.12	35.55
Os03t0727000-02	Rice	nucleus	40.51	34.9
Os03t0771500-01	Rice	nucleus	37.3	34.52
Os03t0673500-00	Rice	nucleus	35.37	31.98
Os03t0727200-00	Rice	nucleus	36.01	30.68
Os02t0182800-01	Rice	nucleus	30.55	30.35
Os06t0646600-01	Rice	nucleus	30.87	29.72
Os03t0123500-02	Rice	nucleus	26.05	25.8
Os03t0772100-00	Rice	vacuole	31.83	23.8

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.4	EntrezGene:4337701	ProteinID:AAU10751.1	EMBL:AB007624	EMBL:AB028885
EMBL:AK111878	ProteinID:BAF16460.1	ProteinID:BAS92104.1	InterPro:ELK_dom	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356
InterPro:IPR005539	InterPro:KNOX1	InterPro:KNOX2	EnsemblPlantsGene:Os05g0129700	EnsemblPlants:Os05t0129700-01	PFAM:PF03789
PFAM:PF03790	PFAM:PF03791	PFAM:PF05920	ScanProsite:PS00027	PFscan:PS50071	PFscan:PS51213
PANTHER:PTHR11850	PANTHER:PTHR11850:SF115	UniProt:Q7GDL5	SMART:SM00389	SMART:SM01188	SMART:SM01255
SMART:SM01256	SUPFAM:SSF46689	UniParc:UPI00000AC8E5	RefSeq:XP_015637898.1	SEG:seg	:

Description

KNOX PROTEIN 2KNOX class homeodomain protein (Knotted1-type homeobox protein OSH71). (Os05t0129700-01)

Coordinates

chr5:-:1724513..1730837

Molecular Weight (calculated)

33350.1 Da

IEP (calculated)

5.014

GRAVY (calculated)

-0.578

Length

311 amino acids

Sequence
(BLAST)

001: MEDLYSIHPG ISRGGGGGGG GAASEASGVA GGGSSPPHPP PPATTAAAAD LTELMKAQIA GHPSYPSLLS AYIECRKVGA PPEVTTLLEE IGREGRGGGG
101: GATAGGEIGL DPELDEFMET YCRVLERYKE ELTRPFDEAA SFLTGIHTQL ASLCGGAPPP TDNSDEMVGS SEDEPCSGDA DAADFGQEHS SRLADHELKE
201: MLLKKYSGCL SRLRSEFLKK RKKGKLPKDA RSALMDWWNT HYRWPYPTEE DKVRLAAMTG LDPKQINNWF INQRKRHWKP SEDMRFALME GVTGGSSSGT
301: TLYFDTGTIG P

Best Arabidopsis Sequence Match ( AT1G23380.1 )
(BLAST)

001: MDGMYNFHSA GDYSDKSVLM MSPESLMFPS DYQALLCSSA GENRVSDVFG SDELLSVAVS ALSSEAASIA PEIRRNDDNV SLTVIKAKIA CHPSYPRLLQ
101: AYIDCQKVGA PPEIACLLEE IQRESDVYKQ EVVPSSCFGA DPELDEFMET YCDILVKYKS DLARPFDEAT CFLNKIEMQL RNLCTGVESA RGVSEDGVIS
201: SDEELSGGDH EVAEDGRQRC EDRDLKDRLL RKFGSRISTL KLEFSKKKKK GKLPREARQA LLDWWNLHYK WPYPTEGDKI ALADATGLDQ KQINNWFINQ
301: RKRHWKPSEN MPFAMMDDSS GSFFTEE

Arabidopsis Description

KNAT6KNOTTED1-like homeobox gene 6 [Source:TAIR;Acc:AT1G23380]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.