Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d027431_P002 | Maize | nucleus | 91.4 | 92.58 |
| KXG40306 | Sorghum | nucleus | 93.31 | 90.71 |
| TraesCS4B01G346100.1 | Wheat | nucleus | 89.81 | 90.38 |
| TraesCS5A01G515000.1 | Wheat | nucleus | 89.81 | 90.38 |
| Zm00001d048471_P001 | Maize | nucleus | 91.08 | 89.94 |
| TraesCS4D01G341000.1 | Wheat | nucleus | 88.85 | 89.71 |
| HORVU4Hr1G084680.1 | Barley | nucleus | 89.49 | 89.21 |
| GSMUA_Achr1P03660_001 | Banana | nucleus | 78.03 | 84.19 |
| KRH27981 | Soybean | nucleus | 66.88 | 75.27 |
| KRH77464 | Soybean | nucleus | 66.88 | 74.73 |
| VIT_02s0025g04630.t01 | Wine grape | nucleus | 68.79 | 74.23 |
| KRH57265 | Soybean | nucleus | 68.79 | 73.72 |
| KRH03996 | Soybean | nucleus | 68.47 | 73.63 |
| CDX93852 | Canola | nucleus | 51.91 | 73.42 |
| Bra036636.1-P | Field mustard | nucleus | 68.47 | 73.13 |
| CDY66559 | Canola | nucleus | 68.15 | 72.79 |
| CDY64892 | Canola | nucleus | 68.15 | 72.79 |
| AT1G62990.1 | Thale cress | nucleus | 67.2 | 72.51 |
| CDY45968 | Canola | nucleus | 66.56 | 71.33 |
| Bra027006.1-P | Field mustard | nucleus | 66.56 | 70.85 |
| Solyc08g080120.2.1 | Tomato | nucleus | 68.47 | 69.35 |
| PGSC0003DMT400058528 | Potato | nucleus | 68.79 | 69.23 |
| Os08t0292900-01 | Rice | nucleus, plasma membrane | 44.9 | 66.82 |
| Os02t0182800-01 | Rice | nucleus | 56.05 | 56.23 |
| Os06t0646600-01 | Rice | nucleus | 56.05 | 54.49 |
| Os03t0673000-00 | Rice | nucleus | 12.1 | 49.35 |
| Os01t0302500-01 | Rice | nucleus | 25.48 | 26.58 |
| Os05t0129700-01 | Rice | nucleus | 25.8 | 26.05 |
| Os03t0771500-01 | Rice | nucleus | 25.16 | 23.51 |
| Os07t0129700-01 | Rice | nucleus | 26.11 | 23.1 |
| Os03t0727000-02 | Rice | nucleus | 25.8 | 22.44 |
| Os03t0673500-00 | Rice | nucleus | 22.93 | 20.93 |
| Os03t0727200-00 | Rice | nucleus | 22.93 | 19.73 |
| Os03t0772100-00 | Rice | vacuole | 21.97 | 16.59 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.4 | EntrezGene:4331449 | ProteinID:AAN74840.1 | ProteinID:AAN74841.1 | EMBL:AB007629 |
| EMBL:AB061819 | ProteinID:ABF93720.1 | ProteinID:ABF93721.1 | ProteinID:ABF93722.1 | ProteinID:ABF93723.1 | ProteinID:BAF10719.1 |
| ProteinID:BAS82051.1 | ProteinID:EEE58243.1 | InterPro:ELK_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010089 |
| GO:GO:0010192 | GO:GO:0045892 | GO:GO:2000652 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom |
| InterPro:IPR001356 | InterPro:IPR005539 | InterPro:KNOX1 | InterPro:KNOX2 | EnsemblPlantsGene:Os03g0123500 | EnsemblPlants:Os03t0123500-02 |
| PFAM:PF03790 | PFAM:PF03791 | PFAM:PF05920 | PFscan:PS50071 | PFscan:PS51213 | PANTHER:PTHR11850 |
| PANTHER:PTHR11850:SF74 | UniProt:Q94LW3 | SMART:SM00389 | SMART:SM01255 | SMART:SM01256 | SUPFAM:SSF46689 |
| UniParc:UPI000009FED6 | RefSeq:XP_015628919.1 | SEG:seg | : | : | : |
Description
HOMEOBOX ORYZA SATIVA 66Similar to HOS66 protein. (Os03t0123500-01);Similar to Homeobox protein knotted-1-like 3. (Os03t0123500-02)
Coordinates
chr3:+:1340068..1345165
Molecular Weight (calculated)
34609.1 Da
IEP (calculated)
6.050
GRAVY (calculated)
-0.531
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MQGGDHGGME MGVGSFTGGG GGGECSSSSA TAAAAAAAAA AAAAAEAEER QLLKGEIAVH PLCEQLVAAH VGCLRVATPI DHLPLIDAQL AQSSGLLHSY
101: AAHHRPFLSP HDKQELDSFL AQYMMLLCSF REQLQQHVRV HAVEAVMACR EIEQSLQDLT GATLEEGTGA TMSEDEDETA PMLEGPMDMG SDGHDLMGFG
201: PLMPTDSERS LMERVRQELK IELKQGFKSR IEDVREEILR KRRAGKLPGD TTTILKQWWQ QHSKWPYPTE DDKAKLVEET GLQLKQINNW FINQRKRNWH
301: NNSQTSTLKS KRKR
101: AAHHRPFLSP HDKQELDSFL AQYMMLLCSF REQLQQHVRV HAVEAVMACR EIEQSLQDLT GATLEEGTGA TMSEDEDETA PMLEGPMDMG SDGHDLMGFG
201: PLMPTDSERS LMERVRQELK IELKQGFKSR IEDVREEILR KRRAGKLPGD TTTILKQWWQ QHSKWPYPTE DDKAKLVEET GLQLKQINNW FINQRKRNWH
301: NNSQTSTLKS KRKR
001: MQEAALGMMG ATVGGDGDTA VVAEQNRQLK GEIATHPMYE QLLAAHVACL RVATPIDQLP IIEAQLSQSH HLLRSYASTA VGYHHDRHEL DNFLAQYVMV
101: LCSFKEQLQQ HVRVHAVEAV MACREIENNL HSLTGATLGE GSGATMSEDE DDLPMDFSSD NSGVDFSGGH DMTGFGPLLP TESERSLMER VRQELKLELK
201: QGFKSRIEDV REEIMRKRRA GKLPGDTTTV LKNWWQQHCK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHNNSH SLTSLKSKRK H
101: LCSFKEQLQQ HVRVHAVEAV MACREIENNL HSLTGATLGE GSGATMSEDE DDLPMDFSSD NSGVDFSGGH DMTGFGPLLP TESERSLMER VRQELKLELK
201: QGFKSRIEDV REEIMRKRRA GKLPGDTTTV LKNWWQQHCK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHNNSH SLTSLKSKRK H
Arabidopsis Description
KNAT7Homeobox protein knotted-1-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.