Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d027431_P002 | Maize | nucleus | 93.08 | 95.48 |
| KXG40306 | Sorghum | nucleus | 94.65 | 93.19 |
| Os03t0123500-02 | Rice | nucleus | 89.94 | 91.08 |
| TraesCS5A01G515000.1 | Wheat | nucleus | 87.11 | 88.78 |
| TraesCS4B01G346100.1 | Wheat | nucleus | 87.11 | 88.78 |
| TraesCS4D01G341000.1 | Wheat | nucleus | 86.16 | 88.1 |
| HORVU4Hr1G084680.1 | Barley | nucleus | 86.16 | 86.98 |
| GSMUA_Achr1P03660_001 | Banana | nucleus | 76.1 | 83.16 |
| KRH27981 | Soybean | nucleus | 66.98 | 76.34 |
| KRH77464 | Soybean | nucleus | 67.3 | 76.16 |
| VIT_02s0025g04630.t01 | Wine grape | nucleus | 68.55 | 74.91 |
| KRH03996 | Soybean | nucleus | 68.55 | 74.66 |
| KRH57265 | Soybean | nucleus | 68.24 | 74.06 |
| CDX93852 | Canola | nucleus | 50.94 | 72.97 |
| AT1G62990.1 | Thale cress | nucleus | 66.35 | 72.51 |
| Bra036636.1-P | Field mustard | nucleus | 66.67 | 72.11 |
| CDY66559 | Canola | nucleus | 66.35 | 71.77 |
| CDY64892 | Canola | nucleus | 66.35 | 71.77 |
| CDY45968 | Canola | nucleus | 65.72 | 71.33 |
| Bra027006.1-P | Field mustard | nucleus | 65.72 | 70.85 |
| Solyc08g080120.2.1 | Tomato | nucleus | 66.67 | 68.39 |
| PGSC0003DMT400058528 | Potato | nucleus | 66.67 | 67.95 |
| Zm00001d046568_P001 | Maize | nucleus | 55.66 | 56.01 |
| Zm00001d053749_P002 | Maize | nucleus | 53.46 | 53.29 |
| Zm00001d015549_P001 | Maize | nucleus | 54.09 | 52.92 |
| Zm00001d040611_P002 | Maize | nucleus | 24.53 | 26.44 |
| Zm00001d035439_P001 | Maize | nucleus | 24.53 | 26.17 |
| Zm00001d010948_P001 | Maize | nucleus | 24.84 | 25.73 |
| Zm00001d033859_P002 | Maize | nucleus | 25.79 | 22.84 |
| Zm00001d018742_P001 | Maize | nucleus | 24.84 | 22.51 |
| Zm00001d007842_P002 | Maize | nucleus | 25.16 | 22.22 |
| Zm00001d033404_P002 | Maize | nucleus | 24.53 | 21.02 |
| Zm00001d033861_P001 | Maize | nucleus | 23.27 | 20.56 |
| Zm00001d034212_P001 | Maize | nucleus | 23.58 | 15.5 |
| Zm00001d013559_P001 | Maize | cytosol, mitochondrion, nucleus | 7.86 | 15.34 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.4 | UniProt:A0A1D6PKW2 | ProteinID:AQL09878.1 | InterPro:ELK_dom | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR005539 |
| InterPro:KNOX1 | InterPro:KNOX2 | PFAM:PF03790 | PFAM:PF03791 | PFAM:PF05920 | PFscan:PS50071 |
| PFscan:PS51213 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF74 | SMART:SM00389 | SMART:SM01255 | SMART:SM01256 |
| SUPFAM:SSF46689 | UniParc:UPI000844E9F5 | EnsemblPlantsGene:Zm00001d048471 | EnsemblPlants:Zm00001d048471_P001 | EnsemblPlants:Zm00001d048471_T001 | SEG:seg |
Description
Homeobox-transcription factor 20Putative knotted-like transcription factor family protein
Coordinates
chr9:-:156890103..156894363
Molecular Weight (calculated)
34770.2 Da
IEP (calculated)
5.895
GRAVY (calculated)
-0.458
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MQGGGGDQTG GSLGMGVGVG YAGGGGGGGA ECSSSSVAAA AAAAAAAAEA EERQLLKGEI AVHPLCEQLV AAHVGCLRVA TPIDHLPLID AQLAQSSGLL
101: HSYAAHHSPF LSPHDKHDLD SFLAQYLMLL CSFREQLQQH VRVHAVEAVM ACREIEQSLQ DLTGVTLEEG TGATMSEEDE DEAPMLEVGL VDMGSDGHDM
201: MGFGPLLPTD SERSLMERVR QELKIELKQG FKSRIEDVRE EILRKRRAGK LPGDTTSILK QWWQQHSKWP YPTEDDKARL VEETGLQLKQ INNWFINQRK
301: RNWHNNSQTS TLKSKRKR
101: HSYAAHHSPF LSPHDKHDLD SFLAQYLMLL CSFREQLQQH VRVHAVEAVM ACREIEQSLQ DLTGVTLEEG TGATMSEEDE DEAPMLEVGL VDMGSDGHDM
201: MGFGPLLPTD SERSLMERVR QELKIELKQG FKSRIEDVRE EILRKRRAGK LPGDTTSILK QWWQQHSKWP YPTEDDKARL VEETGLQLKQ INNWFINQRK
301: RNWHNNSQTS TLKSKRKR
001: MQEAALGMMG ATVGGDGDTA VVAEQNRQLK GEIATHPMYE QLLAAHVACL RVATPIDQLP IIEAQLSQSH HLLRSYASTA VGYHHDRHEL DNFLAQYVMV
101: LCSFKEQLQQ HVRVHAVEAV MACREIENNL HSLTGATLGE GSGATMSEDE DDLPMDFSSD NSGVDFSGGH DMTGFGPLLP TESERSLMER VRQELKLELK
201: QGFKSRIEDV REEIMRKRRA GKLPGDTTTV LKNWWQQHCK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHNNSH SLTSLKSKRK H
101: LCSFKEQLQQ HVRVHAVEAV MACREIENNL HSLTGATLGE GSGATMSEDE DDLPMDFSSD NSGVDFSGGH DMTGFGPLLP TESERSLMER VRQELKLELK
201: QGFKSRIEDV REEIMRKRRA GKLPGDTTTV LKNWWQQHCK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHNNSH SLTSLKSKRK H
Arabidopsis Description
KNAT7Homeobox protein knotted-1-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.