Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 3
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU90921 | Sorghum | nucleus | 64.88 | 89.97 |
| TraesCS5B01G410600.1 | Wheat | nucleus | 46.07 | 70.57 |
| TraesCS5A01G405900.1 | Wheat | nucleus | 47.93 | 69.67 |
| TraesCS5D01G415900.1 | Wheat | nucleus | 47.93 | 68.44 |
| CDY34012 | Canola | nucleus | 24.59 | 61.66 |
| Zm00001d018742_P001 | Maize | nucleus | 44.21 | 60.97 |
| Zm00001d007842_P002 | Maize | nucleus | 44.42 | 59.72 |
| GSMUA_Achr10P... | Banana | nucleus | 30.58 | 56.92 |
| HORVU5Hr1G098570.6 | Barley | plastid | 47.73 | 56.9 |
| Os03t0771500-01 | Rice | nucleus | 36.78 | 52.98 |
| VIT_18s0001g08380.t01 | Wine grape | nucleus | 38.02 | 49.73 |
| Solyc04g077210.2.1 | Tomato | nucleus | 34.92 | 47.61 |
| PGSC0003DMT400012712 | Potato | nucleus | 35.33 | 47.5 |
| KRH61471 | Soybean | nucleus | 35.12 | 47.09 |
| KRG88661 | Soybean | nucleus | 37.4 | 46.77 |
| KRH15482 | Soybean | nucleus | 37.19 | 46.75 |
| Zm00001d033859_P002 | Maize | nucleus | 34.09 | 45.96 |
| AT4G08150.1 | Thale cress | nucleus | 36.57 | 44.47 |
| Bra000638.1-P | Field mustard | nucleus | 35.33 | 44.19 |
| CDX83145 | Canola | nucleus | 35.33 | 42.54 |
| Zm00001d040611_P002 | Maize | nucleus | 25.83 | 42.37 |
| Zm00001d035439_P001 | Maize | nucleus | 25.62 | 41.61 |
| Zm00001d033861_P001 | Maize | nucleus | 30.79 | 41.39 |
| Zm00001d010948_P001 | Maize | nucleus | 26.24 | 41.37 |
| Zm00001d033404_P002 | Maize | nucleus | 31.2 | 40.7 |
| Zm00001d013559_P001 | Maize | cytosol, mitochondrion, nucleus | 13.64 | 40.49 |
| Os03t0772100-00 | Rice | vacuole | 31.2 | 36.3 |
| CDY68624 | Canola | nucleus | 26.03 | 36.1 |
| Zm00001d046568_P001 | Maize | nucleus | 18.39 | 28.16 |
| Zm00001d053749_P002 | Maize | nucleus | 18.18 | 27.59 |
| Zm00001d015549_P001 | Maize | nucleus | 17.98 | 26.77 |
| Zm00001d027431_P002 | Maize | nucleus | 15.7 | 24.52 |
| Zm00001d048471_P001 | Maize | nucleus | 15.5 | 23.58 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.4 | UniProt:A0A1D6L675 | InterPro:ELK_dom | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR005539 | InterPro:KNOX1 | InterPro:KNOX2 | ProteinID:ONM09805.1 | PFAM:PF03789 | PFAM:PF03790 |
| PFAM:PF03791 | PFAM:PF05920 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS51213 | PANTHER:PTHR11850 |
| PANTHER:PTHR11850:SF203 | SMART:SM00389 | SMART:SM01188 | SMART:SM01255 | SMART:SM01256 | SUPFAM:SSF46689 |
| UniParc:UPI0008438B97 | EnsemblPlantsGene:Zm00001d034212 | EnsemblPlants:Zm00001d034212_P001 | EnsemblPlants:Zm00001d034212_T001 | SEG:seg | : |
Description
Homeobox-transcription factor 8 Homeobox-transcription factor 8
Coordinates
chr1:+:286887707..286896784
Molecular Weight (calculated)
52904.0 Da
IEP (calculated)
6.511
GRAVY (calculated)
-0.648
Length
484 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSFGDLGGG GSSSSRAASA PFLQLPLPAS TSSSAQQQQV FPPPDGPQQQ HYHHSSRIPL RQLLLLADPS SAAQHSHRKA DMATVQGEMS SPAADGDADA
101: IKARIMSHPH RNKEASYSDA MDSFGDLGGG GSSSSRAASA PFLQLPLPAS TSSAQQQVLF PLPDGPQQQH HHHSSRIPLR QLLLLADPSS AAQHSASHRT
201: KDMATVQGEM SSPAVDGDAD AIKARIMSHP QYSALLAAYL DCQKVGAPPD VSDRLSAMAA ANLDAQPGPI SRRRGPTTTR ADDPELDQFM EAYCNMLVKF
301: HEEMARPIQE ATEFFNSMER QLGSTISDSN CEVAGSSEDE QDASWPEEID PCAEDKELKH QLLRKYGGYL GGLRQEFSKR KKKGKLPKEA RQKLLHWWEL
401: HYKWPYPSET EKMALAETTG LDPKQINNWF INQRKRHWKP ASEDMPFAVM EGGFHVAQGT AALYMDRPAV PPFMADGGMY RLGS
101: IKARIMSHPH RNKEASYSDA MDSFGDLGGG GSSSSRAASA PFLQLPLPAS TSSAQQQVLF PLPDGPQQQH HHHSSRIPLR QLLLLADPSS AAQHSASHRT
201: KDMATVQGEM SSPAVDGDAD AIKARIMSHP QYSALLAAYL DCQKVGAPPD VSDRLSAMAA ANLDAQPGPI SRRRGPTTTR ADDPELDQFM EAYCNMLVKF
301: HEEMARPIQE ATEFFNSMER QLGSTISDSN CEVAGSSEDE QDASWPEEID PCAEDKELKH QLLRKYGGYL GGLRQEFSKR KKKGKLPKEA RQKLLHWWEL
401: HYKWPYPSET EKMALAETTG LDPKQINNWF INQRKRHWKP ASEDMPFAVM EGGFHVAQGT AALYMDRPAV PPFMADGGMY RLGS
001: MDGMYNFHSA GDYSDKSVLM MSPESLMFPS DYQALLCSSA GENRVSDVFG SDELLSVAVS ALSSEAASIA PEIRRNDDNV SLTVIKAKIA CHPSYPRLLQ
101: AYIDCQKVGA PPEIACLLEE IQRESDVYKQ EVVPSSCFGA DPELDEFMET YCDILVKYKS DLARPFDEAT CFLNKIEMQL RNLCTGVESA RGVSEDGVIS
201: SDEELSGGDH EVAEDGRQRC EDRDLKDRLL RKFGSRISTL KLEFSKKKKK GKLPREARQA LLDWWNLHYK WPYPTEGDKI ALADATGLDQ KQINNWFINQ
301: RKRHWKPSEN MPFAMMDDSS GSFFTEE
101: AYIDCQKVGA PPEIACLLEE IQRESDVYKQ EVVPSSCFGA DPELDEFMET YCDILVKYKS DLARPFDEAT CFLNKIEMQL RNLCTGVESA RGVSEDGVIS
201: SDEELSGGDH EVAEDGRQRC EDRDLKDRLL RKFGSRISTL KLEFSKKKKK GKLPREARQA LLDWWNLHYK WPYPTEGDKI ALADATGLDQ KQINNWFINQ
301: RKRHWKPSEN MPFAMMDDSS GSFFTEE
Arabidopsis Description
KNAT6KNOTTED1-like homeobox gene 6 [Source:TAIR;Acc:AT1G23380]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.