Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
cytosol:
11891300
nucleus: 11891300 cytosol: 12900451 nucleus: 12900451 |
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90950 | Sorghum | nucleus | 92.48 | 92.22 |
| Os03t0727000-02 | Rice | nucleus | 82.73 | 82.27 |
| TraesCS4D01G058000.1 | Wheat | nucleus | 80.22 | 79.56 |
| TraesCS4A01G256700.1 | Wheat | nucleus | 80.22 | 79.56 |
| TraesCS4B01G057900.1 | Wheat | nucleus | 80.22 | 79.34 |
| HORVU4Hr1G009730.1 | Barley | nucleus | 79.94 | 78.85 |
| CDY34012 | Canola | nucleus | 36.21 | 67.36 |
| GSMUA_Achr7P27540_001 | Banana | nucleus | 62.67 | 64.29 |
| GSMUA_Achr3P26230_001 | Banana | nucleus | 57.1 | 63.66 |
| GSMUA_Achr4P03120_001 | Banana | nucleus | 49.3 | 61.03 |
| VIT_18s0001g08380.t01 | Wine grape | nucleus | 54.32 | 52.7 |
| Solyc04g077210.2.1 | Tomato | nucleus | 51.81 | 52.39 |
| PGSC0003DMT400012712 | Potato | nucleus | 51.81 | 51.67 |
| KRH15482 | Soybean | nucleus | 54.6 | 50.91 |
| KRG88661 | Soybean | nucleus | 54.32 | 50.39 |
| KRH61471 | Soybean | nucleus | 50.42 | 50.14 |
| Zm00001d018742_P001 | Maize | nucleus | 48.75 | 49.86 |
| AT4G08150.1 | Thale cress | nucleus | 53.48 | 48.24 |
| Bra000638.1-P | Field mustard | nucleus | 51.81 | 48.06 |
| Zm00001d007842_P002 | Maize | nucleus | 48.19 | 48.06 |
| CDX83145 | Canola | nucleus | 51.81 | 46.27 |
| Zm00001d040611_P002 | Maize | nucleus | 36.49 | 44.41 |
| Zm00001d033861_P001 | Maize | nucleus | 42.9 | 42.78 |
| Zm00001d035439_P001 | Maize | nucleus | 35.38 | 42.62 |
| Zm00001d010948_P001 | Maize | nucleus | 36.21 | 42.35 |
| CDY68624 | Canola | nucleus | 39.28 | 40.4 |
| Zm00001d033404_P002 | Maize | nucleus | 40.39 | 39.08 |
| Zm00001d013559_P001 | Maize | cytosol, mitochondrion, nucleus | 17.27 | 38.04 |
| Zm00001d034212_P001 | Maize | nucleus | 45.96 | 34.09 |
| Zm00001d046568_P001 | Maize | nucleus | 27.02 | 30.7 |
| Zm00001d015549_P001 | Maize | nucleus | 27.02 | 29.85 |
| Zm00001d053749_P002 | Maize | nucleus | 26.46 | 29.78 |
| Zm00001d027431_P002 | Maize | nucleus | 22.28 | 25.81 |
| Zm00001d048471_P001 | Maize | nucleus | 22.84 | 25.79 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.4 | EntrezGene:542391 | ProteinID:AAP21616.1 | ProteinID:AAP76321.1 | InterPro:ELK_dom |
| EMBL:EU961952 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0003723 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005856 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009506 | GO:GO:0009987 | GO:GO:0010497 |
| GO:GO:0015630 | GO:GO:0030054 | GO:GO:0042803 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR005539 | InterPro:KNOX1 | InterPro:KNOX2 |
| ProteinID:ONM08819.1 | UniProt:P24345 | PFAM:PF03789 | PFAM:PF03790 | PFAM:PF03791 | PFAM:PF05920 |
| ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS51213 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF203 | UniProt:Q53ZF1 |
| SMART:SM00389 | SMART:SM01188 | SMART:SM01255 | SMART:SM01256 | SUPFAM:SSF46689 | UniParc:UPI000012C92E |
| EMBL:X61308 | EnsemblPlantsGene:Zm00001d033859 | EnsemblPlants:Zm00001d033859_P002 | EnsemblPlants:Zm00001d033859_T002 | SEG:seg | : |
Description
knotted1Homeotic protein knotted-1
Coordinates
chr1:-:276073436..276081242
Molecular Weight (calculated)
39828.9 Da
IEP (calculated)
6.908
GRAVY (calculated)
-0.635
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEITQHFGV GASSHGHGHG QHHHHHHHHH PWASSLSAVV APLPPQPPSA GLPLTLNTVA ATGNSGGSGN PVLQLANGGG LLDACVKAKE PSSSSPYAGD
101: VEAIKAKIIS HPHYYSLLTA YLECNKVGAP PEVSARLTEI AQEVEARQRT ALGGLAAATE PELDQFMEAY HEMLVKFREE LTRPLQEAME FMRRVESQLN
201: SLSISGRSLR NILSSGSSEE DQEGSGGETE LPEVDAHGVD QELKHHLLKK YSGYLSSLKQ ELSKKKKKGK LPKEARQQLL SWWDQHYKWP YPSETQKVAL
301: AESTGLDLKQ INNWFINQRK RHWKPSEEMH HLMMDGYHTT NAFYMDGHFI NDGGLYRLG
101: VEAIKAKIIS HPHYYSLLTA YLECNKVGAP PEVSARLTEI AQEVEARQRT ALGGLAAATE PELDQFMEAY HEMLVKFREE LTRPLQEAME FMRRVESQLN
201: SLSISGRSLR NILSSGSSEE DQEGSGGETE LPEVDAHGVD QELKHHLLKK YSGYLSSLKQ ELSKKKKKGK LPKEARQQLL SWWDQHYKWP YPSETQKVAL
301: AESTGLDLKQ INNWFINQRK RHWKPSEEMH HLMMDGYHTT NAFYMDGHFI NDGGLYRLG
001: MEEYQHDNST TPQRVSFLYS PISSSNKNDN TSDTNNNNNN NNSSNYGPGY NNTNNNNHHH QHMLFPHMSS LLPQTTENCF RSDHDQPNNN NNPSVKSEAS
101: SSRINHYSML MRAIHNTQEA NNNNNDNVSD VEAMKAKIIA HPHYSTLLQA YLDCQKIGAP PDVVDRITAA RQDFEARQQR STPSVSASSR DPELDQFMEA
201: YCDMLVKYRE ELTRPIQEAM EFIRRIESQL SMLCQSPIHI LNNPDGKSDN MGSSDEEQEN NSGGETELPE IDPRAEDREL KNHLLKKYSG YLSSLKQELS
301: KKKKKGKLPK EARQKLLTWW ELHYKWPYPS ESEKVALAES TGLDQKQINN WFINQRKRHW KPSEDMQFMV MDGLQHPHHA ALYMDGHYMG DGPYRLGP
101: SSRINHYSML MRAIHNTQEA NNNNNDNVSD VEAMKAKIIA HPHYSTLLQA YLDCQKIGAP PDVVDRITAA RQDFEARQQR STPSVSASSR DPELDQFMEA
201: YCDMLVKYRE ELTRPIQEAM EFIRRIESQL SMLCQSPIHI LNNPDGKSDN MGSSDEEQEN NSGGETELPE IDPRAEDREL KNHLLKKYSG YLSSLKQELS
301: KKKKKGKLPK EARQKLLTWW ELHYKWPYPS ESEKVALAES TGLDQKQINN WFINQRKRHW KPSEDMQFMV MDGLQHPHHA ALYMDGHYMG DGPYRLGP
Arabidopsis Description
KNAT1Homeobox protein knotted-1-like 1 [Source:UniProtKB/Swiss-Prot;Acc:P46639]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.