Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G454600.1 | Wheat | nucleus | 53.8 | 96.59 |
| KXG20488 | Sorghum | nucleus | 95.57 | 94.67 |
| TraesCS7D01G501000.1 | Wheat | nucleus | 87.34 | 89.32 |
| Os06t0646600-01 | Rice | nucleus | 90.82 | 88.85 |
| TraesCS1B01G135600.1 | Wheat | nucleus | 73.73 | 82.92 |
| TraesCS7B01G423100.2 | Wheat | nucleus | 85.44 | 80.6 |
| Zm00001d053749_P002 | Maize | nucleus | 80.7 | 79.94 |
| Zm00001d015549_P001 | Maize | nucleus | 81.65 | 79.38 |
| HORVU7Hr1G114650.2 | Barley | nucleus | 75.63 | 73.99 |
| CDX88165 | Canola | nucleus | 66.14 | 69.9 |
| TraesCS7A01G511800.2 | Wheat | nucleus | 87.03 | 68.75 |
| Solyc08g041820.2.1 | Tomato | nucleus | 64.56 | 58.45 |
| Zm00001d027431_P002 | Maize | nucleus | 56.65 | 57.74 |
| KRG98594 | Soybean | extracellular | 14.87 | 57.32 |
| PGSC0003DMT400040351 | Potato | nucleus | 65.51 | 56.71 |
| Zm00001d048471_P001 | Maize | nucleus | 56.01 | 55.66 |
| Bra006085.1-P | Field mustard | nucleus | 67.09 | 54.92 |
| CDX78407 | Canola | nucleus | 67.09 | 54.92 |
| CDY05371 | Canola | nucleus | 69.62 | 54.46 |
| AT5G11060.1 | Thale cress | nucleus | 67.09 | 53.94 |
| Bra028554.1-P | Field mustard | nucleus | 65.82 | 53.75 |
| CDY51104 | Canola | nucleus | 66.77 | 53.69 |
| CDX85732 | Canola | nucleus | 66.77 | 53.69 |
| KRH52385 | Soybean | nucleus | 67.09 | 53.27 |
| KRH05245 | Soybean | nucleus | 68.67 | 52.8 |
| CDY05480 | Canola | nucleus | 69.3 | 52.14 |
| CDX68812 | Canola | nucleus | 61.71 | 52.14 |
| KRH15810 | Soybean | nucleus | 67.72 | 51.94 |
| CDX75215 | Canola | nucleus | 61.39 | 51.87 |
| KRH61712 | Soybean | nucleus | 67.41 | 51.82 |
| Bra011317.1-P | Field mustard | nucleus | 61.08 | 51.6 |
| AT5G25220.1 | Thale cress | nucleus | 70.25 | 51.51 |
| AT4G32040.1 | Thale cress | nucleus | 62.34 | 51.44 |
| CDY13472 | Canola | nucleus | 61.39 | 50.79 |
| Bra023965.1-P | Field mustard | nucleus | 61.39 | 50.65 |
| VIT_04s0008g06130.t01 | Wine grape | nucleus | 67.72 | 50.12 |
| Bra009826.1-P | Field mustard | nucleus | 65.19 | 49.76 |
| CDX72343 | Canola | nucleus | 62.03 | 49.0 |
| Bra020491.1-P | Field mustard | nucleus | 58.54 | 47.07 |
| CDX80491 | Canola | nucleus | 66.14 | 47.07 |
| CDX70374 | Canola | nucleus | 43.35 | 45.36 |
| Zm00001d035439_P001 | Maize | nucleus | 30.06 | 31.88 |
| Zm00001d010948_P001 | Maize | nucleus | 30.38 | 31.27 |
| Zm00001d040611_P002 | Maize | nucleus | 28.8 | 30.85 |
| Zm00001d033859_P002 | Maize | nucleus | 30.7 | 27.02 |
| Zm00001d018742_P001 | Maize | nucleus | 28.48 | 25.64 |
| Zm00001d007842_P002 | Maize | nucleus | 28.48 | 25.0 |
| Zm00001d033861_P001 | Maize | nucleus | 28.16 | 24.72 |
| Zm00001d033404_P002 | Maize | nucleus | 27.53 | 23.45 |
| Zm00001d013559_P001 | Maize | cytosol, mitochondrion, nucleus | 10.13 | 19.63 |
| Zm00001d034212_P001 | Maize | nucleus | 28.16 | 18.39 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:103638717 | MapMan:15.5.3.4 | ProteinID:AQL04535.1 | InterPro:ELK_dom | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR005539 |
| UniProt:K7VF27 | InterPro:KNOX1 | InterPro:KNOX2 | PFAM:PF03789 | PFAM:PF03790 | PFAM:PF03791 |
| PFAM:PF05920 | PFscan:PS50071 | PFscan:PS51213 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF133 | SMART:SM00389 |
| SMART:SM01188 | SMART:SM01255 | SMART:SM01256 | SUPFAM:SSF46689 | UniParc:UPI0001B635D9 | EnsemblPlantsGene:Zm00001d046568 |
| EnsemblPlants:Zm00001d046568_P001 | EnsemblPlants:Zm00001d046568_T001 | SEG:seg | : | : | : |
Description
knotted related homeobox2 knotted related homeobox2
Coordinates
chr9:+:96269799..96278027
Molecular Weight (calculated)
34524.5 Da
IEP (calculated)
5.966
GRAVY (calculated)
-0.563
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFNYHDHAL AMDPAAAAAV GAAANPSFVS GGGMAGGPGW EREKAAIAAH PLYERLLEAH VACLRVATPV DQLPRIDAQI AARPPPMEAA AAAAAAGGAH
101: SGGEELDLFM THYVLLLCSF KEQLQQHVRV HAMEAVMACW ELEQTLQSLT GASPGEGTGA TMSDDEDNQV DSESNMFDGN EGSDGMGFGP LMLTEGERSL
201: VERVRQELKH ELKQGYRDKL VDIREEILRK RRAGKLPGDT ASTLKAWWQA HSKWPYPTEE DKARLVQETG LQLKQINNWF INQRKRNWHN NSASSSSDKS
301: KRKRNTAGDG NAEPAW
101: SGGEELDLFM THYVLLLCSF KEQLQQHVRV HAMEAVMACW ELEQTLQSLT GASPGEGTGA TMSDDEDNQV DSESNMFDGN EGSDGMGFGP LMLTEGERSL
201: VERVRQELKH ELKQGYRDKL VDIREEILRK RRAGKLPGDT ASTLKAWWQA HSKWPYPTEE DKARLVQETG LQLKQINNWF INQRKRNWHN NSASSSSDKS
301: KRKRNTAGDG NAEPAW
001: MAFHHNHLSQ DLSFNHFTDQ HQPPPPQPPP PPPQQQQHFQ EAPPPNWLNT ALLRSSDNNN NFLNLHTATA NTTTASSSDS PSSAAAAAAA NQWLSRSSSF
101: LQRNNNNNAS IVGDGIDDVT GGADTMIQGE MKTGGGENKN DGGGATAADG VVSWQNARHK AEILSHPLYE QLLSAHVACL RIATPVDQLP RIDAQLAQSQ
201: HVVAKYSALG AAAQGLVGDD KELDQFMTHY VLLLCSFKEQ LQQHVRVHAM EAVMACWEIE QSLQSLTGVS PGEGMGATMS DDEDEQVESD ANMFDGGLDV
301: LGFGPLIPTE SERSLMERVR QELKHELKQG YKEKIVDIRE EILRKRRAGK LPGDTTSVLK AWWQSHSKWP YPTEEDKARL VQETGLQLKQ INNWFINQRK
401: RNWHSNPSSS TVLKNKRKSN AGDNSGRERF A
101: LQRNNNNNAS IVGDGIDDVT GGADTMIQGE MKTGGGENKN DGGGATAADG VVSWQNARHK AEILSHPLYE QLLSAHVACL RIATPVDQLP RIDAQLAQSQ
201: HVVAKYSALG AAAQGLVGDD KELDQFMTHY VLLLCSFKEQ LQQHVRVHAM EAVMACWEIE QSLQSLTGVS PGEGMGATMS DDEDEQVESD ANMFDGGLDV
301: LGFGPLIPTE SERSLMERVR QELKHELKQG YKEKIVDIRE EILRKRRAGK LPGDTTSVLK AWWQSHSKWP YPTEEDKARL VQETGLQLKQ INNWFINQRK
401: RNWHSNPSSS TVLKNKRKSN AGDNSGRERF A
Arabidopsis Description
KNAT3KNAT3 [Source:UniProtKB/TrEMBL;Acc:A0A178U9D1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.