Factsheet for Zm00001d020198_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d015549_P001
Zm00001d046568_P001
Zm00001d053749_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G79960.1	Zm00001d015549_P001	AT5G25220.1	15781858
AT1G79960.1	Zm00001d046568_P001	AT5G25220.1	15781858
AT1G79960.1	Zm00001d053749_P002	AT5G25220.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96623	Sorghum	nucleus	66.02	62.83
TraesCS5D01G195300.1	Wheat	nucleus	50.0	47.06
HORVU5Hr1G056810.1	Barley	nucleus	48.44	46.1
TraesCS5A01G195700.1	Wheat	nucleus, plastid	48.05	45.22
TraesCS5B01G187700.1	Wheat	nucleus	47.66	45.02
Zm00001d044357_P001	Maize	cytosol	27.73	29.83
Zm00001d027739_P001	Maize	nucleus, plastid	21.09	29.51
GSMUA_Achr8P04020_001	Banana	mitochondrion	28.91	28.24
KRH09849	Soybean	mitochondrion, nucleus	25.0	25.7
CDX87287	Canola	nucleus, plastid	24.22	21.68
Bra035202.1-P	Field mustard	nucleus, plastid	24.22	21.68
CDY58777	Canola	nucleus, plastid	23.44	21.05
VIT_09s0002g04630.t01	Wine grape	mitochondrion, nucleus	22.66	20.86
AT1G79960.1	Thale cress	nucleus, plastid	23.83	20.75
KRH47051	Soybean	nucleus	22.66	20.57
CDY37564	Canola	plastid	22.66	19.66
Bra008500.1-P	Field mustard	plastid	22.66	19.66
Solyc03g120190.2.1	Tomato	plastid	21.09	19.64
CDY41111	Canola	plastid	22.66	19.46
PGSC0003DMT400014515	Potato	nucleus	21.48	19.1
KRH44372	Soybean	nucleus	12.5	17.02

Protein Annotations

EntrezGene:100274967	MapMan:15.5.37	UniProt:B6SLZ3	EMBL:EU953758	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	ProteinID:ONM54458.1
InterPro:Ovate	InterPro:Ovate_C	PFAM:PF04844	PFscan:PS51754	PANTHER:PTHR33057	PANTHER:PTHR33057:SF34
TIGRFAMs:TIGR01568	UniParc:UPI000182B62C	EnsemblPlantsGene:Zm00001d020198	EnsemblPlants:Zm00001d020198_P001	EnsemblPlants:Zm00001d020198_T001	SEG:seg

Description

OVATE-transcription factor 30Transcription repressor OFP14

Coordinates

chr7:+:98791002..98791772

Molecular Weight (calculated)

27400.9 Da

IEP (calculated)

10.282

GRAVY (calculated)

-0.728

Length

256 amino acids

Sequence
(BLAST)

001: MEEAEAEEEN KSTKAAGMGC KKNVTRLQRS FLHLSRALGK LHGRRGHGNA NGEASLSSSS SAATSSFLSG CMHPRTHSFA LGRRHRHKRD GGGSGSGDAL
101: AVNFRSLQVD DEGGSSSAQH CYHGDRGSEA DEPKAVVRGA GVAVATLSAA PYEDFRRSMR EMVEAAAGTG SGGAAAAAVD WDFMEELLFC YLRLNDRAVH
201: KDILRAFTDT VAAIRRRRRA AKSSRTRRRR RRQPRPGGDG PGRGDDCDGA EAVTSS

Best Arabidopsis Sequence Match ( AT1G79960.1 )
(BLAST)

001: MPNPLQKSLH GYLSKIKKET GKLQLSSSHS FSSSKNWVLG KHPKKLSFSF KHRRRSSKTR FSKEEPVYHQ DSAHAATLSD IDRFLEENFK SLCIRDDQED
101: DQHQARVTKN KEKRESSSDD SDDDDDDDDY RHRFERTWGH AVYDSPKQPP DLLRTERLSP PPGSSEGRPS METTSTSSER QSRSTLVLPE NCIAVLRYTD
201: EPQEDFRQSM VEMMESKLGM RESEVDWDLM EELLFCYLDL NDKKSHKFIL SAFVDLIIAL REKEKRITRK GHVRSLSTRA ARDRLRKRMI MSDN

Arabidopsis Description

OFP14OFP14 [Source:UniProtKB/TrEMBL;Acc:A0A178W942]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.