Factsheet for PGSC0003DMT400014515

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
mitochondrion 1
nucleus 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400040351

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G79960.1	PGSC0003DMT400040351	AT5G25220.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g120190.2.1	Tomato	plastid	83.33	87.27
KRH09849	Soybean	mitochondrion, nucleus	35.76	41.37
VIT_09s0002g04630.t01	Wine grape	mitochondrion, nucleus	36.46	37.77
GSMUA_Achr8P04020_001	Banana	mitochondrion	30.21	33.21
TraesCS6D01G041100.1	Wheat	nucleus, plastid	26.74	32.22
AT1G79960.1	Thale cress	nucleus, plastid	32.29	31.63
TraesCS6A01G035700.1	Wheat	nucleus	26.39	31.28
Bra035202.1-P	Field mustard	nucleus, plastid	30.56	30.77
CDX87287	Canola	nucleus, plastid	30.56	30.77
TraesCS6B01G050100.1	Wheat	nucleus	25.0	30.13
HORVU6Hr1G006440.1	Barley	cytosol	25.35	29.55
CDY58777	Canola	nucleus, plastid	29.17	29.47
Bra008500.1-P	Field mustard	plastid	29.86	29.15
CDY37564	Canola	plastid	29.86	29.15
CDY41111	Canola	plastid	29.86	28.86
KRH47051	Soybean	nucleus	28.12	28.72
EES00995	Sorghum	nucleus	23.26	28.51
Zm00001d044357_P001	Maize	cytosol	23.26	28.15
EER92063	Sorghum	nucleus	22.92	27.97
PGSC0003DMT400082125	Potato	cytosol, mitochondrion	21.18	27.73
PGSC0003DMT400049756	Potato	mitochondrion	19.79	25.0
Zm00001d020198_P001	Maize	nucleus	19.1	21.48
TraesCS5B01G187700.1	Wheat	nucleus	20.14	21.4
EER96623	Sorghum	nucleus	19.79	21.19
HORVU5Hr1G056810.1	Barley	nucleus	19.44	20.82
KRH44372	Soybean	nucleus	13.54	20.74
TraesCS5A01G195700.1	Wheat	nucleus, plastid	19.1	20.22
TraesCS5D01G195300.1	Wheat	nucleus	19.1	20.22

Protein Annotations

EnsemblPlants:PGSC0003DMT400014515	EnsemblPlantsGene:PGSC0003DMG400005682	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C	PANTHER:PTHR33057
PANTHER:PTHR33057:SF29	PFAM:PF04844	PFscan:PS51754	PGSC:PGSC0003DMG400005682	SEG:seg	TIGRFAMs:TIGR01568
UniParc:UPI0002950057	UniProt:M1A4D2	MapMan:15.5.37	:	:	:

Description

ovate family protein 14 [Source:Projected from Arabidopsis thaliana (AT1G79960) TAIR;Acc:AT1G79960]

Coordinates

chr3:+:59539927..59541275

Molecular Weight (calculated)

32242.5 Da

IEP (calculated)

6.533

GRAVY (calculated)

-0.735

Length

288 amino acids

Sequence
(BLAST)

001: MPKQLQKSLS DYLTKKKNKP TPQQTTNSTN KTLSSSTSWL LHGCRHPKTP SFSAVDRKEK NVQGENDAAT LADVDRFVFE NFKSFYYNDD DNEAEANTSI
101: LKKGKKEEIA GSPNSLSESP RYVIPPLNHT GSRRFFVAPG SSSSLIEEAR TSMTVSDDTG STSAITTTTA TNTNSNELSA ISTEYSKGTL NADDFITLVT
201: YSPSPYDDFR QSMQEMMEAR LNDQGKINWE FMEELLFCYL NLNDKKSHKY ILSAFVDQIV VLRENSGRIP AISRNVRPLG GELNQRNT

Best Arabidopsis Sequence Match ( AT1G79960.1 )
(BLAST)

001: MPNPLQKSLH GYLSKIKKET GKLQLSSSHS FSSSKNWVLG KHPKKLSFSF KHRRRSSKTR FSKEEPVYHQ DSAHAATLSD IDRFLEENFK SLCIRDDQED
101: DQHQARVTKN KEKRESSSDD SDDDDDDDDY RHRFERTWGH AVYDSPKQPP DLLRTERLSP PPGSSEGRPS METTSTSSER QSRSTLVLPE NCIAVLRYTD
201: EPQEDFRQSM VEMMESKLGM RESEVDWDLM EELLFCYLDL NDKKSHKFIL SAFVDLIIAL REKEKRITRK GHVRSLSTRA ARDRLRKRMI MSDN

Arabidopsis Description

OFP14OFP14 [Source:UniProtKB/TrEMBL;Acc:A0A178W942]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.