Factsheet for Bra035202.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009826.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G79960.1	Bra009826.1-P	AT5G25220.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87287	Canola	nucleus, plastid	99.65	99.65
CDY58777	Canola	nucleus, plastid	95.8	96.14
Bra008500.1-P	Field mustard	plastid	60.84	58.98
AT1G79960.1	Thale cress	nucleus, plastid	59.44	57.82
KRH09849	Soybean	mitochondrion, nucleus	32.52	37.35
VIT_09s0002g04630.t01	Wine grape	mitochondrion, nucleus	32.87	33.81
Solyc03g120190.2.1	Tomato	plastid	31.47	32.73
PGSC0003DMT400014515	Potato	nucleus	30.77	30.56
KRH47051	Soybean	nucleus	27.97	28.37
TraesCS6D01G041100.1	Wheat	nucleus, plastid	23.43	28.03
Zm00001d044357_P001	Maize	cytosol	23.08	27.73
EES00995	Sorghum	nucleus	22.73	27.66
TraesCS6A01G035700.1	Wheat	nucleus	23.08	27.16
HORVU6Hr1G006440.1	Barley	cytosol	23.43	27.13
EER92063	Sorghum	nucleus	22.03	26.69
GSMUA_Achr8P04020_001	Banana	mitochondrion	23.78	25.95
TraesCS6B01G050100.1	Wheat	nucleus	21.68	25.94
KRH44372	Soybean	nucleus	16.43	25.0
Zm00001d020198_P001	Maize	nucleus	21.68	24.22
TraesCS5D01G195300.1	Wheat	nucleus	22.03	23.16
TraesCS5B01G187700.1	Wheat	nucleus	21.68	22.88
HORVU5Hr1G056810.1	Barley	nucleus	21.33	22.68
Bra036908.1-P	Field mustard	plastid	16.78	22.43
TraesCS5A01G195700.1	Wheat	nucleus, plastid	20.98	22.06
EER96623	Sorghum	nucleus	20.63	21.93
Bra005611.1-P	Field mustard	cytosol	16.43	19.83
Bra032464.1-P	Field mustard	nucleus, plastid	13.99	17.62

Protein Annotations

EnsemblPlants:Bra035202.1	EnsemblPlants:Bra035202.1-P	EnsemblPlantsGene:Bra035202	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C
PANTHER:PTHR33057	PANTHER:PTHR33057:SF29	PFAM:PF04844	PFscan:PS51754	SEG:seg	TIGRFAMs:TIGR01568
UniParc:UPI0002541EA2	UniProt:M4F2A4	MapMan:15.5.37	:	:	:

Description

AT1G79960 (E=2e-106) ATOFP14, OFP14 | OFP14 (OVATE FAMILY PROTEIN 14)

Coordinates

chrA07:+:22569854..22570714

Molecular Weight (calculated)

32774.6 Da

IEP (calculated)

9.456

GRAVY (calculated)

-0.937

Length

286 amino acids

Sequence
(BLAST)

001: MPNPLQKSLH GYLSKIKKET GKLQVSNSFS SSKKWVLAGC KHPKKLSFSF KHRRRPSKTR FNDDHVYQDP GHAATLSDID RFLEENFKSL CIRDEEGEED
101: AKSKGKREQQ SSSSDEDDTD DYSHRFERTW GPAVYDSPKL PRTERLSPPP GSSEGRASMY TTSEEGPSSS RSKSSSLVLP EKCIAVLRYT EEPQEDFKRS
201: MVEMMESKLG GSEVDWDLME ELLFCYLDLN NKKSHKFILS AFVDLIISLR DKEKSITRKG LVRSLSTRAA RERLRKRMAS SDAFRN

Best Arabidopsis Sequence Match ( AT1G79960.1 )
(BLAST)

001: MPNPLQKSLH GYLSKIKKET GKLQLSSSHS FSSSKNWVLG KHPKKLSFSF KHRRRSSKTR FSKEEPVYHQ DSAHAATLSD IDRFLEENFK SLCIRDDQED
101: DQHQARVTKN KEKRESSSDD SDDDDDDDDY RHRFERTWGH AVYDSPKQPP DLLRTERLSP PPGSSEGRPS METTSTSSER QSRSTLVLPE NCIAVLRYTD
201: EPQEDFRQSM VEMMESKLGM RESEVDWDLM EELLFCYLDL NDKKSHKFIL SAFVDLIIAL REKEKRITRK GHVRSLSTRA ARDRLRKRMI MSDN

Arabidopsis Description

OFP14OFP14 [Source:UniProtKB/TrEMBL;Acc:A0A178W942]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.