Factsheet for Bra005611.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64911	Canola	cytosol	99.58	99.58
AT2G32100.1	Thale cress	nucleus	62.87	61.07
Bra032464.1-P	Field mustard	nucleus, plastid	47.68	49.78
VIT_05s0020g03520.t01	Wine grape	plastid	35.02	37.22
KRH35514	Soybean	plastid	27.43	36.11
KRG91320	Soybean	plastid	28.27	35.26
Solyc09g082080.1.1	Tomato	cytosol, mitochondrion	31.22	35.07
PGSC0003DMT400082125	Potato	cytosol, mitochondrion	30.8	33.18
Zm00001d027739_P001	Maize	nucleus, plastid	25.32	32.79
GSMUA_Achr3P30930_001	Banana	mitochondrion	27.43	30.95
GSMUA_Achr4P07580_001	Banana	plastid	27.43	30.66
TraesCS4B01G275200.1	Wheat	mitochondrion	25.32	29.41
TraesCS4D01G273800.1	Wheat	mitochondrion	25.32	29.13
HORVU4Hr1G073070.1	Barley	mitochondrion	24.47	28.16
EER92828	Sorghum	mitochondrion	24.89	28.1
TraesCS4A01G030800.1	Wheat	mitochondrion	24.05	27.8
Bra036908.1-P	Field mustard	plastid	24.89	27.57
Os03t0159400-01	Rice	mitochondrion	24.05	26.64
Bra008500.1-P	Field mustard	plastid	21.1	16.95
Bra035202.1-P	Field mustard	nucleus, plastid	19.83	16.43

Protein Annotations

EnsemblPlants:Bra005611.1	EnsemblPlants:Bra005611.1-P	EnsemblPlantsGene:Bra005611	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C
PANTHER:PTHR33057	PANTHER:PTHR33057:SF21	PFAM:PF04844	PFscan:PS51754	SEG:seg	TIGRFAMs:TIGR01568
UniParc:UPI00025477D0	UniProt:M4CN23	MapMan:15.5.37	:	:	:

Description

AT2G32100 (E=1e-056) ATOFP16, OFP16 | OFP16 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16)

Coordinates

chrA05:-:6527449..6528162

Molecular Weight (calculated)

26415.7 Da

IEP (calculated)

5.551

GRAVY (calculated)

-0.480

Length

237 amino acids

Sequence
(BLAST)

001: MPKIMWKSLH LCFPSNLTKC YSSPCLPPSA AAAAEDDDPS RPSIVLINNF NLLYHNDHNN YHHRVVDLPS SSTATTFSSS ATSSYESESQ DISPELSAAF
101: ASRRFFFSSP GRSNAITDSP ETRSRELSDN SDSATIKTPK KTKYDTSMNT TRLLSGGSAV KQHVYSPDPL TDFRRSMQEM IDAAIEAGDL SHPDEGYDYL
201: NELLLSYLAL NPTDMHKFII RAFSDIMVSL LSEERRI

Best Arabidopsis Sequence Match ( AT2G32100.1 )
(BLAST)

001: MPKILWKSLH LCFPSNLTKC YSSPCIPPSS ADPDGIIQPN RPSIVLLNNF NLLYHNDNHH HPHRVIDLPS SSTTTTPAAT SSSSTSSYES DISPDVSAAF
101: ASRRFFFSSP GRSNAITDSP EPRSREFSDN YDDATITSTK KKKKKVYDNS VTTTTTRLIS GGTAVTQHVD SPDPLTDFRR SMQEMIDAAI DAGELSRDPN
201: DGYDFLDELL LTYLSLNPAD THKFVIRAFS DILVSLLSEE RRIC

Arabidopsis Description

OFP16Transcription repressor OFP16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKY9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.