Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005611.1-P | Field mustard | cytosol | 61.07 | 62.87 |
| CDY64911 | Canola | cytosol | 60.66 | 62.45 |
| CDY12233 | Canola | mitochondrion | 59.43 | 61.44 |
| AT1G05420.2 | Thale cress | mitochondrion, plastid | 45.9 | 46.28 |
| VIT_05s0020g03520.t01 | Wine grape | plastid | 32.79 | 35.87 |
| Solyc09g082080.1.1 | Tomato | cytosol, mitochondrion | 30.33 | 35.07 |
| KRG91320 | Soybean | plastid | 27.05 | 34.74 |
| KRH35514 | Soybean | plastid | 25.0 | 33.89 |
| AT4G14860.1 | Thale cress | plastid | 25.0 | 33.52 |
| GSMUA_Achr3P30930_001 | Banana | mitochondrion | 28.69 | 33.33 |
| PGSC0003DMT400082125 | Potato | cytosol, mitochondrion | 29.92 | 33.18 |
| GSMUA_Achr4P07580_001 | Banana | plastid | 28.28 | 32.55 |
| Zm00001d027739_P001 | Maize | nucleus, plastid | 24.18 | 32.24 |
| TraesCS4B01G275200.1 | Wheat | mitochondrion | 24.59 | 29.41 |
| EER92828 | Sorghum | mitochondrion | 24.59 | 28.57 |
| TraesCS4A01G030800.1 | Wheat | mitochondrion | 23.77 | 28.29 |
| HORVU4Hr1G073070.1 | Barley | mitochondrion | 23.36 | 27.67 |
| TraesCS4D01G273800.1 | Wheat | mitochondrion | 23.36 | 27.67 |
| Os03t0159400-01 | Rice | mitochondrion | 24.18 | 27.57 |
| AT1G79960.1 | Thale cress | nucleus, plastid | 19.26 | 15.99 |
Protein Annotations
| MapMan:15.5.37 | EntrezGene:817770 | UniProt:A0A178W325 | ProteinID:AAD15394.1 | ProteinID:AEC08635.1 | EMBL:AF370597 |
| ArrayExpress:AT2G32100 | EnsemblPlantsGene:AT2G32100 | RefSeq:AT2G32100 | TAIR:AT2G32100 | RefSeq:AT2G32100-TAIR-G | EnsemblPlants:AT2G32100.1 |
| TAIR:AT2G32100.1 | Symbol:ATOFP16 | EMBL:BT029532 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | RefSeq:NP_180770.1 | ProteinID:OAP11743.1 |
| InterPro:Ovate | InterPro:Ovate_C | PFAM:PF04844 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PFscan:PS51754 | PANTHER:PTHR33057 | PANTHER:PTHR33057:SF21 | UniProt:Q9SKY9 | TIGRFAMs:TIGR01568 |
| UniParc:UPI00000A6076 | SEG:seg | : | : | : | : |
Description
OFP16Transcription repressor OFP16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKY9]
Coordinates
chr2:+:13647699..13649002
Molecular Weight (calculated)
27063.5 Da
IEP (calculated)
6.082
GRAVY (calculated)
-0.470
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MPKILWKSLH LCFPSNLTKC YSSPCIPPSS ADPDGIIQPN RPSIVLLNNF NLLYHNDNHH HPHRVIDLPS SSTTTTPAAT SSSSTSSYES DISPDVSAAF
101: ASRRFFFSSP GRSNAITDSP EPRSREFSDN YDDATITSTK KKKKKVYDNS VTTTTTRLIS GGTAVTQHVD SPDPLTDFRR SMQEMIDAAI DAGELSRDPN
201: DGYDFLDELL LTYLSLNPAD THKFVIRAFS DILVSLLSEE RRIC
101: ASRRFFFSSP GRSNAITDSP EPRSREFSDN YDDATITSTK KKKKKVYDNS VTTTTTRLIS GGTAVTQHVD SPDPLTDFRR SMQEMIDAAI DAGELSRDPN
201: DGYDFLDELL LTYLSLNPAD THKFVIRAFS DILVSLLSEE RRIC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.