CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
extracellular 1
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35514	Soybean	plastid	68.42	72.22
VIT_05s0020g03520.t01	Wine grape	plastid	42.63	36.32
Zm00001d027739_P001	Maize	nucleus, plastid	32.11	33.33
KRH71408	Soybean	cytosol	35.26	32.84
Solyc09g082080.1.1	Tomato	cytosol, mitochondrion	35.79	32.23
CDY10106	Canola	cytosol	35.79	31.48
KRH32029	Soybean	cytosol	35.79	31.05
AT4G14860.1	Thale cress	plastid	29.47	30.77
PGSC0003DMT400082125	Potato	cytosol, mitochondrion	35.26	30.45
EER92828	Sorghum	mitochondrion	33.16	30.0
GSMUA_Achr3P30930_001	Banana	mitochondrion	32.11	29.05
Os03t0159400-01	Rice	mitochondrion	32.63	28.97
AT1G05420.2	Thale cress	mitochondrion, plastid	36.84	28.93
CDY47289	Canola	cytosol	35.79	28.81
GSMUA_Achr4P07580_001	Banana	plastid	32.11	28.77
CDY10024	Canola	nucleus	34.21	28.63
CDY06168	Canola	cytosol, mitochondrion	34.74	28.57
CDY12233	Canola	mitochondrion	35.26	28.39
CDY42794	Canola	plastid	27.89	28.34
CDY64911	Canola	cytosol	35.26	28.27
Bra005611.1-P	Field mustard	cytosol	35.26	28.27
Bra032464.1-P	Field mustard	nucleus, plastid	33.68	28.19
KRH67233	Soybean	nucleus, plastid	36.84	28.0
TraesCS4B01G275200.1	Wheat	mitochondrion	30.0	27.94
TraesCS4A01G030800.1	Wheat	mitochondrion	30.0	27.8
TraesCS4D01G273800.1	Wheat	mitochondrion	30.0	27.67
HORVU4Hr1G073070.1	Barley	mitochondrion	30.0	27.67
CDY29776	Canola	plastid	27.37	27.66
AT2G32100.1	Thale cress	nucleus	34.74	27.05
KRG95550	Soybean	mitochondrion, plastid	35.26	25.57
Bra036908.1-P	Field mustard	plastid	26.84	23.83
KRH09849	Soybean	mitochondrion, nucleus	24.74	18.88
KRH47051	Soybean	nucleus	21.58	14.54
KRH44372	Soybean	nucleus	13.16	13.3

Protein Annotations

EntrezGene:102666896	MapMan:15.5.37	EMBL:ACUP02012676	EnsemblPlantsGene:GLYMA_20G147700	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	UniProt:K7N3I4
EnsemblPlants:KRG91320	ProteinID:KRG91320	ProteinID:KRG91320.1	InterPro:Ovate	InterPro:Ovate_C	PFAM:PF04844
PFscan:PS51754	PANTHER:PTHR33057	PANTHER:PTHR33057:SF65	TIGRFAMs:TIGR01568	UniParc:UPI0001BA53E0	SEG:seg

Description

hypothetical protein

Coordinates

chr20:+:38610968..38612116

Molecular Weight (calculated)

21517.7 Da

IEP (calculated)

8.652

GRAVY (calculated)

-0.282

Length

190 amino acids

Sequence
(BLAST)

001: MPSLFSKHLH LCFLKLKYPT ILCQPHHSDH TPPPSSSDNS TIFPFTDTTT TTSSGSSTEP DFASIFASQR FFFSSPGTSN SIVESPDTRT FMIPTGGGVR
101: VPKYSLNPYV DFLRSMQEMI RSRQVLDITK DSEYLHELLL CYLALNPTHT HKFILRAFTD LVLQLLSSAP CLTHNHNHHR RHRSLSGRLL

Best Arabidopsis Sequence Match ( AT1G05420.2 )
(BLAST)

001: MLNTYSLTLF LTKTKTMPRV MWKNFHLCFP SNLTKPSSSP SGATSDDPNR PSILLINNFN LLYDDSSAAH RRLSKPLIHD VEPSSTFTAS TSTAANSSSS
101: SASYDDSDNY GFAPDDDSPP PDLTAVLASR RFFFSSPGCS NSITDSPDLR CRDNYDTATR LLTGGTAVKH YVQSPDPYND FRRSMQEMID AVTNAGDLRR
201: YEFLHELLLS YLSLNAADTH KFIIRAFADI LVSLLSDGHR IS

Arabidopsis Description

ATOFP12ovate family protein 12 [Source:TAIR;Acc:AT1G05420]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.