Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- plastid 5
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr3P30930_001 | Banana | mitochondrion | 63.21 | 63.81 |
TraesCS4A01G030800.1 | Wheat | mitochondrion | 42.45 | 43.9 |
Zm00001d027739_P001 | Maize | nucleus, plastid | 37.26 | 43.17 |
TraesCS4B01G275200.1 | Wheat | mitochondrion | 40.57 | 42.16 |
EER92828 | Sorghum | mitochondrion | 41.51 | 41.9 |
TraesCS4D01G273800.1 | Wheat | mitochondrion | 40.57 | 41.75 |
HORVU4Hr1G073070.1 | Barley | mitochondrion | 40.57 | 41.75 |
Os03t0159400-01 | Rice | mitochondrion | 41.04 | 40.65 |
VIT_05s0020g03520.t01 | Wine grape | plastid | 38.21 | 36.32 |
KRH71408 | Soybean | cytosol | 33.96 | 35.29 |
KRH32029 | Soybean | cytosol | 34.43 | 33.33 |
AT4G14860.1 | Thale cress | plastid | 28.3 | 32.97 |
PGSC0003DMT400082125 | Potato | cytosol, mitochondrion | 33.49 | 32.27 |
Solyc09g082080.1.1 | Tomato | cytosol, mitochondrion | 32.08 | 32.23 |
KRH35514 | Soybean | plastid | 27.36 | 32.22 |
KRG91320 | Soybean | plastid | 28.77 | 32.11 |
PGSC0003DMT400049756 | Potato | mitochondrion | 33.96 | 31.58 |
CDY42794 | Canola | plastid | 27.36 | 31.02 |
CDY10106 | Canola | cytosol | 31.13 | 30.56 |
CDY29776 | Canola | plastid | 26.42 | 29.79 |
Bra032464.1-P | Field mustard | nucleus, plastid | 31.6 | 29.52 |
CDY10024 | Canola | nucleus | 31.13 | 29.07 |
CDY06168 | Canola | cytosol, mitochondrion | 31.6 | 29.0 |
AT1G05420.2 | Thale cress | mitochondrion, plastid | 33.02 | 28.93 |
KRH67233 | Soybean | nucleus, plastid | 33.96 | 28.8 |
AT2G32100.1 | Thale cress | nucleus | 32.55 | 28.28 |
CDY47289 | Canola | cytosol | 31.13 | 27.97 |
CDY12233 | Canola | mitochondrion | 30.66 | 27.54 |
KRG95550 | Soybean | mitochondrion, plastid | 33.96 | 27.48 |
CDY64911 | Canola | cytosol | 30.66 | 27.43 |
Bra005611.1-P | Field mustard | cytosol | 30.66 | 27.43 |
Bra036908.1-P | Field mustard | plastid | 26.42 | 26.17 |
GSMUA_Achr8P04020_001 | Banana | mitochondrion | 24.53 | 19.85 |
Protein Annotations
EnsemblPlants:GSMUA_Achr4P07580_001 | EnsemblPlants:GSMUA_Achr4T07580_001 | EnsemblPlantsGene:GSMUA_Achr4G07580_001 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C |
PANTHER:PTHR33057 | PANTHER:PTHR33057:SF21 | PFAM:PF04844 | PFscan:PS51754 | SEG:seg | TIGRFAMs:TIGR01568 |
UniParc:UPI000296F43D | UniProt:M0SLX5 | MapMan:15.5.37 | : | : | : |
Description
Putative Protein HIRA [Source:GMGC_GENE;Acc:GSMUA_Achr4G07580_001]
Coordinates
chr4:-:5607512..5608150
Molecular Weight (calculated)
21702.3 Da
IEP (calculated)
5.835
GRAVY (calculated)
0.082
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MFGDSLYSCF SGHRRPSHSA PLPISLDARA AAATTCCSSS SSCASSVAFK NFNSLYDPGS DTETLALTLS SPAAAAAGSS FSSSCDAPDD ADAGGSCPSE
101: RDLSTAIASR RLLPASPGLS NSIVDSAAVT VGVGAGVAVP TYSPDPYWDF RRSMEEMVAA LGLDAGAHRA HLHDLLLCYL ALNRKHAHKY IISAFADLLL
201: TLASAKGAPG DA
101: RDLSTAIASR RLLPASPGLS NSIVDSAAVT VGVGAGVAVP TYSPDPYWDF RRSMEEMVAA LGLDAGAHRA HLHDLLLCYL ALNRKHAHKY IISAFADLLL
201: TLASAKGAPG DA
001: MLNTYSLTLF LTKTKTMPRV MWKNFHLCFP SNLTKPSSSP SGATSDDPNR PSILLINNFN LLYDDSSAAH RRLSKPLIHD VEPSSTFTAS TSTAANSSSS
101: SASYDDSDNY GFAPDDDSPP PDLTAVLASR RFFFSSPGCS NSITDSPDLR CRDNYDTATR LLTGGTAVKH YVQSPDPYND FRRSMQEMID AVTNAGDLRR
201: YEFLHELLLS YLSLNAADTH KFIIRAFADI LVSLLSDGHR IS
101: SASYDDSDNY GFAPDDDSPP PDLTAVLASR RFFFSSPGCS NSITDSPDLR CRDNYDTATR LLTGGTAVKH YVQSPDPYND FRRSMQEMID AVTNAGDLRR
201: YEFLHELLLS YLSLNAADTH KFIIRAFADI LVSLLSDGHR IS
Arabidopsis Description
ATOFP12ovate family protein 12 [Source:TAIR;Acc:AT1G05420]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.