Factsheet for Bra032464.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06168	Canola	cytosol, mitochondrion	98.68	96.97
AT1G05420.2	Thale cress	mitochondrion, plastid	68.28	64.05
Bra005611.1-P	Field mustard	cytosol	49.78	47.68
VIT_05s0020g03520.t01	Wine grape	plastid	40.97	41.7
Solyc09g082080.1.1	Tomato	cytosol, mitochondrion	33.48	36.02
KRH35514	Soybean	plastid	27.75	35.0
KRG91320	Soybean	plastid	28.19	33.68
PGSC0003DMT400082125	Potato	cytosol, mitochondrion	32.6	33.64
GSMUA_Achr3P30930_001	Banana	mitochondrion	30.4	32.86
Zm00001d027739_P001	Maize	nucleus, plastid	26.43	32.79
GSMUA_Achr4P07580_001	Banana	plastid	29.52	31.6
Bra036908.1-P	Field mustard	plastid	28.19	29.91
HORVU4Hr1G073070.1	Barley	mitochondrion	26.43	29.13
TraesCS4B01G275200.1	Wheat	mitochondrion	25.99	28.92
TraesCS4D01G273800.1	Wheat	mitochondrion	25.55	28.16
EER92828	Sorghum	mitochondrion	25.99	28.1
TraesCS4A01G030800.1	Wheat	mitochondrion	25.11	27.8
Os03t0159400-01	Rice	mitochondrion	25.55	27.1
Bra008500.1-P	Field mustard	plastid	19.82	15.25
Bra035202.1-P	Field mustard	nucleus, plastid	17.62	13.99

Protein Annotations

EnsemblPlants:Bra032464.1	EnsemblPlants:Bra032464.1-P	EnsemblPlantsGene:Bra032464	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C
PANTHER:PTHR33057	PANTHER:PTHR33057:SF21	PFAM:PF04844	PFscan:PS51754	SEG:seg	TIGRFAMs:TIGR01568
UniParc:UPI0002543537	UniProt:M4EUI2	MapMan:15.5.37	:	:	:

Description

AT1G05420 (E=1e-058) ATOFP12, OFP12 | OFP12 (OVATE FAMILY PROTEIN 12)

Coordinates

chrA09:+:36177858..36178541

Molecular Weight (calculated)

25080.7 Da

IEP (calculated)

4.635

GRAVY (calculated)

-0.468

Length

227 amino acids

Sequence
(BLAST)

001: MWKSFHHCFP SNLNNPSSSP SDAAASDDDP NRPSILLINN FNLLYSDSSP TDRPISKRLI DAEPSSTTTF TASTSTAAYS SSASFDESDD YDFTPEHSPP
101: PDLTSVLASS RFFVSSPGRS NLITDSPDLR PRFNYETATA TTTTRLLTGG TAVKQYVQSP DPYNDFRRSM QEMLDAVTDA GDVRRYEFLH ELLLSYLSLN
201: AADTHKFIIR AFADILVSLL SDGHRTS

Best Arabidopsis Sequence Match ( AT1G05420.2 )
(BLAST)

001: MLNTYSLTLF LTKTKTMPRV MWKNFHLCFP SNLTKPSSSP SGATSDDPNR PSILLINNFN LLYDDSSAAH RRLSKPLIHD VEPSSTFTAS TSTAANSSSS
101: SASYDDSDNY GFAPDDDSPP PDLTAVLASR RFFFSSPGCS NSITDSPDLR CRDNYDTATR LLTGGTAVKH YVQSPDPYND FRRSMQEMID AVTNAGDLRR
201: YEFLHELLLS YLSLNAADTH KFIIRAFADI LVSLLSDGHR IS

Arabidopsis Description

ATOFP12ovate family protein 12 [Source:TAIR;Acc:AT1G05420]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.