Factsheet for Solyc09g082080.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 2
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400082125	Potato	cytosol, mitochondrion	84.36	80.91
VIT_05s0020g03520.t01	Wine grape	plastid	44.55	42.15
KRH35514	Soybean	plastid	32.23	37.78
KRG91320	Soybean	plastid	32.23	35.79
CDY10106	Canola	cytosol	36.49	35.65
CDY06168	Canola	cytosol, mitochondrion	37.91	34.63
Bra032464.1-P	Field mustard	nucleus, plastid	36.02	33.48
GSMUA_Achr3P30930_001	Banana	mitochondrion	33.18	33.33
AT1G05420.2	Thale cress	mitochondrion, plastid	37.91	33.06
CDY10024	Canola	nucleus	35.55	33.04
Zm00001d027739_P001	Maize	nucleus, plastid	28.44	32.79
CDY47289	Canola	cytosol	36.49	32.63
GSMUA_Achr4P07580_001	Banana	plastid	32.23	32.08
AT4G14860.1	Thale cress	plastid	27.49	31.87
CDY64911	Canola	cytosol	35.55	31.65
CDY12233	Canola	mitochondrion	35.07	31.36
Bra005611.1-P	Field mustard	cytosol	35.07	31.22
CDY42794	Canola	plastid	27.01	30.48
AT2G32100.1	Thale cress	nucleus	35.07	30.33
CDY29776	Canola	plastid	26.54	29.79
TraesCS4A01G030800.1	Wheat	mitochondrion	27.96	28.78
TraesCS4B01G275200.1	Wheat	mitochondrion	27.49	28.43
HORVU4Hr1G073070.1	Barley	mitochondrion	27.49	28.16
TraesCS4D01G273800.1	Wheat	mitochondrion	27.01	27.67
Os03t0159400-01	Rice	mitochondrion	27.96	27.57
EER92828	Sorghum	mitochondrion	27.01	27.14
Bra036908.1-P	Field mustard	plastid	26.54	26.17
Solyc03g120190.2.1	Tomato	plastid	28.44	21.82

Protein Annotations

EnsemblPlants:Solyc09g082080.1.1	EnsemblPlantsGene:Solyc09g082080.1	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C	PANTHER:PTHR33057
PANTHER:PTHR33057:SF21	PFAM:PF04844	PFscan:PS51754	SEG:seg	TIGRFAMs:TIGR01568	UniParc:UPI000276BF5C
UniProt:K4CVI5	MapMan:15.5.37	:	:	:	:

Description

No Description!

Coordinates

chr9:-:67915411..67916046

Molecular Weight (calculated)

24044.0 Da

IEP (calculated)

4.815

GRAVY (calculated)

-0.561

Length

211 amino acids

Sequence
(BLAST)

001: MPRILQKKFY HCLPSFKCLP TILSLPFEET EEEKTEQKKI KNFNSVFDIP SSDSATTSKS LTNSSTTTTE EEDNNTNCTF TSFEDSDYTN IPDFSNIFAS
101: QRFFFSSPGN SNSIIDFPPE NPKVVTGGVA VQTYSPDPYS DFRRSMQEMV EAHELTNVKA NWGFLHELLL CYLNLNPKHT HKYIIRAYSD LVVSLMSMDD
201: SEKKTEGIAR P

Best Arabidopsis Sequence Match ( AT1G05420.2 )
(BLAST)

001: MLNTYSLTLF LTKTKTMPRV MWKNFHLCFP SNLTKPSSSP SGATSDDPNR PSILLINNFN LLYDDSSAAH RRLSKPLIHD VEPSSTFTAS TSTAANSSSS
101: SASYDDSDNY GFAPDDDSPP PDLTAVLASR RFFFSSPGCS NSITDSPDLR CRDNYDTATR LLTGGTAVKH YVQSPDPYND FRRSMQEMID AVTNAGDLRR
201: YEFLHELLLS YLSLNAADTH KFIIRAFADI LVSLLSDGHR IS

Arabidopsis Description

ATOFP12ovate family protein 12 [Source:TAIR;Acc:AT1G05420]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.