Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- mitochondrion 3
- cytosol 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY29776 | Canola | plastid | 90.37 | 89.89 |
AT4G14860.1 | Thale cress | plastid | 67.38 | 69.23 |
VIT_05s0020g03520.t01 | Wine grape | plastid | 37.97 | 31.84 |
KRH35514 | Soybean | plastid | 27.81 | 28.89 |
CDY10106 | Canola | cytosol | 33.16 | 28.7 |
GSMUA_Achr3P30930_001 | Banana | mitochondrion | 31.55 | 28.1 |
KRG91320 | Soybean | plastid | 28.34 | 27.89 |
GSMUA_Achr4P07580_001 | Banana | plastid | 31.02 | 27.36 |
CDY06168 | Canola | cytosol, mitochondrion | 33.69 | 27.27 |
Solyc09g082080.1.1 | Tomato | cytosol, mitochondrion | 30.48 | 27.01 |
CDY10024 | Canola | nucleus | 32.62 | 26.87 |
CDY12233 | Canola | mitochondrion | 32.62 | 25.85 |
CDY47289 | Canola | cytosol | 32.62 | 25.85 |
CDY64911 | Canola | cytosol | 32.62 | 25.74 |
HORVU4Hr1G073070.1 | Barley | mitochondrion | 28.34 | 25.73 |
PGSC0003DMT400082125 | Potato | cytosol, mitochondrion | 29.95 | 25.45 |
TraesCS4B01G275200.1 | Wheat | mitochondrion | 27.27 | 25.0 |
Zm00001d027739_P001 | Maize | nucleus, plastid | 24.06 | 24.59 |
Os03t0159400-01 | Rice | mitochondrion | 27.27 | 23.83 |
EER92828 | Sorghum | mitochondrion | 26.74 | 23.81 |
TraesCS4A01G030800.1 | Wheat | mitochondrion | 25.67 | 23.41 |
TraesCS4D01G273800.1 | Wheat | mitochondrion | 25.13 | 22.82 |
CDX87287 | Canola | nucleus, plastid | 25.67 | 16.78 |
CDY58777 | Canola | nucleus, plastid | 24.6 | 16.14 |
CDY37564 | Canola | plastid | 23.53 | 14.92 |
CDY41111 | Canola | plastid | 23.53 | 14.77 |
Protein Annotations
EnsemblPlants:CDY42794 | EnsemblPlantsGene:GSBRNA2T00075358001 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | PANTHER:PTHR33057 |
PANTHER:PTHR33057:SF21 | PFAM:PF04844 | PFscan:PS51754 | ProteinID:CDY42794 | ProteinID:CDY42794.1 | SEG:seg |
TIGRFAMs:TIGR01568 | UniParc:UPI0004EDE42B | UniProt:A0A078HZM3 | MapMan:15.5.37 | : | : |
Description
BnaC01g22720DBnaC01g22720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZM3]
Coordinates
chrLK032534:+:197644..198282
Molecular Weight (calculated)
20904.6 Da
IEP (calculated)
7.158
GRAVY (calculated)
-0.321
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTFLRKKLH LCFSSSGVVS PSIPSSPIVV PNHNPPSHHH HHTPSIFINN FNSLYDHLSV SSPLHRNDKF TSVAAALTTP KSGEIGSNEN YAVVSKLLSD
101: GTAILKHIDS PDPCRDFGRS MREMVEARDP TRDDVSDREY LNELLFCYLS LNPKHTHKFI VSAFADTLLW LLSQSSSPEY YPLSQSI
101: GTAILKHIDS PDPCRDFGRS MREMVEARDP TRDDVSDREY LNELLFCYLS LNPKHTHKFI VSAFADTLLW LLSQSSSPEY YPLSQSI
001: MSNFLRKKLH LCFSSSGGLS PSIPSSPIIV SNHNAQSHPH HTPSIFINNF NSLYDQLSVS SPLHRRHSSE NPAGVFSTNR REEEEEDETT TSVSKLLSGG
101: TAIMKHIESP DPYRDFGRSM REMVEARDLT RDVVADREYL HELLFCYLYL NPKHTHRFIV SAFADTLLWL LSPSPSPEHF LS
101: TAIMKHIESP DPYRDFGRSM REMVEARDLT RDVVADREYL HELLFCYLYL NPKHTHRFIV SAFADTLLWL LSPSPSPEHF LS
Arabidopsis Description
OFP11Transcription repressor OFP11 [Source:UniProtKB/Swiss-Prot;Acc:O23341]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.