Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29776 | Canola | plastid | 71.43 | 69.15 |
| CDY42794 | Canola | plastid | 69.23 | 67.38 |
| Bra036908.1-P | Field mustard | plastid | 69.78 | 59.35 |
| VIT_05s0020g03520.t01 | Wine grape | plastid | 40.11 | 32.74 |
| KRG91320 | Soybean | plastid | 30.77 | 29.47 |
| GSMUA_Achr3P30930_001 | Banana | mitochondrion | 33.52 | 29.05 |
| KRH35514 | Soybean | plastid | 28.02 | 28.33 |
| GSMUA_Achr4P07580_001 | Banana | plastid | 32.97 | 28.3 |
| Solyc09g082080.1.1 | Tomato | cytosol, mitochondrion | 31.87 | 27.49 |
| AT1G05420.2 | Thale cress | mitochondrion, plastid | 36.26 | 27.27 |
| PGSC0003DMT400082125 | Potato | cytosol, mitochondrion | 31.32 | 25.91 |
| AT2G32100.1 | Thale cress | nucleus | 33.52 | 25.0 |
| Zm00001d027739_P001 | Maize | nucleus, plastid | 24.73 | 24.59 |
| TraesCS4B01G275200.1 | Wheat | mitochondrion | 27.47 | 24.51 |
| HORVU4Hr1G073070.1 | Barley | mitochondrion | 27.47 | 24.27 |
| TraesCS4A01G030800.1 | Wheat | mitochondrion | 25.27 | 22.44 |
| Os03t0159400-01 | Rice | mitochondrion | 26.37 | 22.43 |
| EER92828 | Sorghum | mitochondrion | 25.82 | 22.38 |
| TraesCS4D01G273800.1 | Wheat | mitochondrion | 24.73 | 21.84 |
| AT1G79960.1 | Thale cress | nucleus, plastid | 28.57 | 17.69 |
Protein Annotations
| MapMan:15.5.37 | EntrezGene:827143 | UniProt:A0A178V3N6 | ProteinID:AEE83510.1 | ArrayExpress:AT4G14860 | EnsemblPlantsGene:AT4G14860 |
| RefSeq:AT4G14860 | TAIR:AT4G14860 | RefSeq:AT4G14860-TAIR-G | EnsemblPlants:AT4G14860.1 | TAIR:AT4G14860.1 | ProteinID:CAB10265.1 |
| ProteinID:CAB78528.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0045892 | InterPro:IPR006458 | RefSeq:NP_193222.1 | UniProt:O23341 | ProteinID:OAO99682.1 | InterPro:Ovate |
| InterPro:Ovate_C | PFAM:PF04844 | PO:PO:0000293 | PFscan:PS51754 | PANTHER:PTHR33057 | PANTHER:PTHR33057:SF21 |
| TIGRFAMs:TIGR01568 | UniParc:UPI00000A8A7B | Symbol:atofp11 | SEG:seg | : | : |
Description
OFP11Transcription repressor OFP11 [Source:UniProtKB/Swiss-Prot;Acc:O23341]
Coordinates
chr4:+:8516372..8517130
Molecular Weight (calculated)
20679.3 Da
IEP (calculated)
6.798
GRAVY (calculated)
-0.464
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNFLRKKLH LCFSSSGGLS PSIPSSPIIV SNHNAQSHPH HTPSIFINNF NSLYDQLSVS SPLHRRHSSE NPAGVFSTNR REEEEEDETT TSVSKLLSGG
101: TAIMKHIESP DPYRDFGRSM REMVEARDLT RDVVADREYL HELLFCYLYL NPKHTHRFIV SAFADTLLWL LSPSPSPEHF LS
101: TAIMKHIESP DPYRDFGRSM REMVEARDLT RDVVADREYL HELLFCYLYL NPKHTHRFIV SAFADTLLWL LSPSPSPEHF LS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.