Factsheet for GSMUA_Achr3P30930_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P07580_001	Banana	plastid	63.81	63.21
TraesCS4B01G275200.1	Wheat	mitochondrion	41.43	42.65
Zm00001d027739_P001	Maize	nucleus, plastid	37.14	42.62
TraesCS4A01G030800.1	Wheat	mitochondrion	41.43	42.44
EER92828	Sorghum	mitochondrion	41.43	41.43
HORVU4Hr1G073070.1	Barley	mitochondrion	40.0	40.78
TraesCS4D01G273800.1	Wheat	mitochondrion	40.0	40.78
Os03t0159400-01	Rice	mitochondrion	40.0	39.25
VIT_05s0020g03520.t01	Wine grape	plastid	37.14	34.98
KRH71408	Soybean	cytosol	32.86	33.82
AT4G14860.1	Thale cress	plastid	29.05	33.52
Solyc09g082080.1.1	Tomato	cytosol, mitochondrion	33.33	33.18
KRH35514	Soybean	plastid	27.62	32.22
KRG91320	Soybean	plastid	29.05	32.11
PGSC0003DMT400049756	Potato	mitochondrion	34.76	32.02
KRH32029	Soybean	cytosol	33.33	31.96
CDY42794	Canola	plastid	28.1	31.55
PGSC0003DMT400082125	Potato	cytosol, mitochondrion	32.86	31.36
CDY10106	Canola	cytosol	31.9	31.02
Bra032464.1-P	Field mustard	nucleus, plastid	32.86	30.4
CDY29776	Canola	plastid	27.14	30.32
CDY06168	Canola	cytosol, mitochondrion	33.33	30.3
CDY10024	Canola	nucleus	32.38	29.96
AT1G05420.2	Thale cress	mitochondrion, plastid	33.33	28.93
AT2G32100.1	Thale cress	nucleus	33.33	28.69
KRH67233	Soybean	nucleus, plastid	33.81	28.4
CDY47289	Canola	cytosol	31.43	27.97
CDY12233	Canola	mitochondrion	31.43	27.97
CDY64911	Canola	cytosol	30.95	27.43
Bra005611.1-P	Field mustard	cytosol	30.95	27.43
KRG95550	Soybean	mitochondrion, plastid	33.33	26.72
Bra036908.1-P	Field mustard	plastid	27.14	26.64
GSMUA_Achr8P04020_001	Banana	mitochondrion	26.19	20.99

Protein Annotations

EnsemblPlants:GSMUA_Achr3P30930_001	EnsemblPlants:GSMUA_Achr3T30930_001	EnsemblPlantsGene:GSMUA_Achr3G30930_001	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C
PANTHER:PTHR33057	PANTHER:PTHR33057:SF21	PFAM:PF04844	PFscan:PS51754	SEG:seg	TIGRFAMs:TIGR01568
UniParc:UPI000296244D	UniProt:M0SJA7	MapMan:15.5.37	:	:	:

Description

Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G30930_001]

Coordinates

chr3:-:29486460..29487092

Molecular Weight (calculated)

21763.3 Da

IEP (calculated)

6.137

GRAVY (calculated)

-0.015

Length

210 amino acids

Sequence
(BLAST)

001: MFGESLYRCF SGFRHASHSA PLPASQNAPA SSSSCDSPVV FKNFNSLYDP ASDSETLSLT LPSSAVAVAA AAAAAGSSFT SSCDAPDDDG GGGGSCPSER
101: DLFSAIASRR LLPASPGRSN SIVDSAAVAV GAGTGVPVPT YSPDPYRDFR RSMEEMVAAL GLDARDHRAH LHELLLCYLA LNRKHAHKYI VSAFADLLLA
201: LASTPAVDKA

Best Arabidopsis Sequence Match ( AT1G05420.2 )
(BLAST)

001: MLNTYSLTLF LTKTKTMPRV MWKNFHLCFP SNLTKPSSSP SGATSDDPNR PSILLINNFN LLYDDSSAAH RRLSKPLIHD VEPSSTFTAS TSTAANSSSS
101: SASYDDSDNY GFAPDDDSPP PDLTAVLASR RFFFSSPGCS NSITDSPDLR CRDNYDTATR LLTGGTAVKH YVQSPDPYND FRRSMQEMID AVTNAGDLRR
201: YEFLHELLLS YLSLNAADTH KFIIRAFADI LVSLLSDGHR IS

Arabidopsis Description

ATOFP12ovate family protein 12 [Source:TAIR;Acc:AT1G05420]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.