Factsheet for Zm00001d027739_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92828	Sorghum	mitochondrion	62.84	54.76
TraesCS4A01G030800.1	Wheat	mitochondrion	56.83	50.73
TraesCS4D01G273800.1	Wheat	mitochondrion	56.83	50.49
Os03t0159400-01	Rice	mitochondrion	58.47	50.0
HORVU4Hr1G073070.1	Barley	mitochondrion	54.64	48.54
TraesCS4B01G275200.1	Wheat	mitochondrion	52.46	47.06
GSMUA_Achr4P07580_001	Banana	plastid	43.17	37.26
GSMUA_Achr3P30930_001	Banana	mitochondrion	42.62	37.14
KRH35514	Soybean	plastid	31.69	32.22
KRG91320	Soybean	plastid	33.33	32.11
Solyc09g082080.1.1	Tomato	cytosol, mitochondrion	32.79	28.44
KRH71408	Soybean	cytosol	31.15	27.94
PGSC0003DMT400082125	Potato	cytosol, mitochondrion	33.33	27.73
CDY10024	Canola	nucleus	33.33	26.87
CDY06168	Canola	cytosol, mitochondrion	33.88	26.84
PGSC0003DMT400049756	Potato	mitochondrion	33.33	26.75
KRH32029	Soybean	cytosol	31.69	26.48
Bra032464.1-P	Field mustard	nucleus, plastid	32.79	26.43
VIT_05s0020g03520.t01	Wine grape	plastid	31.69	26.01
CDY10106	Canola	cytosol	30.6	25.93
CDY12233	Canola	mitochondrion	32.79	25.42
CDY64911	Canola	cytosol	32.79	25.32
Bra005611.1-P	Field mustard	cytosol	32.79	25.32
AT1G05420.2	Thale cress	mitochondrion, plastid	32.79	24.79
AT4G14860.1	Thale cress	plastid	24.59	24.73
AT2G32100.1	Thale cress	nucleus	32.24	24.18
CDY42794	Canola	plastid	24.59	24.06
CDY29776	Canola	plastid	24.59	23.94
CDY47289	Canola	cytosol	30.6	23.73
KRH67233	Soybean	nucleus, plastid	32.24	23.6
KRG95550	Soybean	mitochondrion, plastid	33.33	23.28
Zm00001d020198_P001	Maize	nucleus	29.51	21.09
Bra036908.1-P	Field mustard	plastid	24.59	21.03
Zm00001d044357_P001	Maize	cytosol	24.59	18.91

Protein Annotations

EnsemblPlants:Zm00001d027739_P001	EnsemblPlants:Zm00001d027739_T001	EnsemblPlantsGene:Zm00001d027739	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C
PANTHER:PTHR33057	PANTHER:PTHR33057:SF21	PFAM:PF04844	PFscan:PS51754	ProteinID:ONL93801.1	SEG:seg
TIGRFAMs:TIGR01568	UniParc:UPI0008435776	UniProt:A0A1D6JP56	MapMan:15.5.37	:	:

Description

OVATE-transcription factor 2Transcription repressor OFP12

Coordinates

chr1:-:12400468..12401019

Molecular Weight (calculated)

18724.6 Da

IEP (calculated)

5.918

GRAVY (calculated)

-0.223

Length

183 amino acids

Sequence
(BLAST)

001: MPAASDDAST STASAAGSTS PCSWSSSARC KDDEDHGGGA VGKDPSALSE PGLSSAIASR RFFLSSPGRS NSIVDSSAHG GGGGAAAAPA LDVGVGAAGV
101: AVPTYSPDPH ADFLRSMEEM AAALRLDARR RGDRARLHEL LLCYLALNDR RAHKYVVSAF TDLLLRLTAA AAAANLSDDD RHE

Best Arabidopsis Sequence Match ( AT1G05420.2 )
(BLAST)

001: MLNTYSLTLF LTKTKTMPRV MWKNFHLCFP SNLTKPSSSP SGATSDDPNR PSILLINNFN LLYDDSSAAH RRLSKPLIHD VEPSSTFTAS TSTAANSSSS
101: SASYDDSDNY GFAPDDDSPP PDLTAVLASR RFFFSSPGCS NSITDSPDLR CRDNYDTATR LLTGGTAVKH YVQSPDPYND FRRSMQEMID AVTNAGDLRR
201: YEFLHELLLS YLSLNAADTH KFIIRAFADI LVSLLSDGHR IS

Arabidopsis Description

ATOFP12ovate family protein 12 [Source:TAIR;Acc:AT1G05420]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.