Factsheet for Zm00001d044357_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d015549_P001
Zm00001d046568_P001
Zm00001d053749_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G79960.1	Zm00001d015549_P001	AT5G25220.1	15781858
AT1G79960.1	Zm00001d046568_P001	AT5G25220.1	15781858
AT1G79960.1	Zm00001d053749_P002	AT5G25220.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00995	Sorghum	nucleus	63.45	64.26
EER92063	Sorghum	nucleus	62.6	63.14
TraesCS6B01G050100.1	Wheat	nucleus	58.82	58.58
TraesCS6D01G041100.1	Wheat	nucleus, plastid	56.3	56.07
TraesCS6A01G035700.1	Wheat	nucleus	55.88	54.73
HORVU6Hr1G006440.1	Barley	cytosol	54.2	52.23
GSMUA_Achr8P04020_001	Banana	mitochondrion	40.34	36.64
KRH09849	Soybean	mitochondrion, nucleus	31.09	29.72
VIT_09s0002g04630.t01	Wine grape	mitochondrion, nucleus	34.03	29.14
Zm00001d020198_P001	Maize	nucleus	29.83	27.73
Solyc03g120190.2.1	Tomato	plastid	28.57	24.73
Zm00001d027739_P001	Maize	nucleus, plastid	18.91	24.59
CDY58777	Canola	nucleus, plastid	28.15	23.51
PGSC0003DMT400014515	Potato	nucleus	28.15	23.26
CDX87287	Canola	nucleus, plastid	27.73	23.08
Bra035202.1-P	Field mustard	nucleus, plastid	27.73	23.08
AT1G79960.1	Thale cress	nucleus, plastid	27.73	22.45
KRH47051	Soybean	nucleus	25.21	21.28
CDY41111	Canola	plastid	24.79	19.8
CDY37564	Canola	plastid	24.37	19.66
Bra008500.1-P	Field mustard	plastid	24.37	19.66
KRH44372	Soybean	nucleus	11.76	14.89

Protein Annotations

EnsemblPlants:Zm00001d044357_P001	EnsemblPlants:Zm00001d044357_T001	EnsemblPlantsGene:Zm00001d044357	EntrezGene:103652609	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate
InterPro:Ovate_C	PANTHER:PTHR33057	PANTHER:PTHR33057:SF29	PFAM:PF04844	PFscan:PS51754	ProteinID:ONM40964.1
SEG:seg	TIGRFAMs:TIGR01568	UniParc:UPI00022110E3	UniProt:A0A1D6NL60	MapMan:15.5.37	:

Description

OVATE-transcription factor 20Transcription repressor OFP14

Coordinates

chr3:+:225734113..225734829

Molecular Weight (calculated)

25908.1 Da

IEP (calculated)

6.090

GRAVY (calculated)

-0.583

Length

238 amino acids

Sequence
(BLAST)

001: MEDDRKRTRL RKSLQLYVSR TLKKIPPIHI PSSAIPANIT SARLLSSCRL PRTPSLDLDG DHAAAGADDN SKDDQAATLS DVDRFLFENF RSLYIHDSDD
101: PSSSGAGTST SVVNDTPPAA ETSSPSSESG SEDKEAGPGE EGGDSAGAAV VLFSMDPYTD FRRSMQNMIK LHHGCACQPL DWDFLEELLF LYLQLNDKAV
201: HKHILRAFAD LTAGTHMASS AAGNAQRADK NRRSRKNC

Best Arabidopsis Sequence Match ( AT1G79960.1 )
(BLAST)

001: MPNPLQKSLH GYLSKIKKET GKLQLSSSHS FSSSKNWVLG KHPKKLSFSF KHRRRSSKTR FSKEEPVYHQ DSAHAATLSD IDRFLEENFK SLCIRDDQED
101: DQHQARVTKN KEKRESSSDD SDDDDDDDDY RHRFERTWGH AVYDSPKQPP DLLRTERLSP PPGSSEGRPS METTSTSSER QSRSTLVLPE NCIAVLRYTD
201: EPQEDFRQSM VEMMESKLGM RESEVDWDLM EELLFCYLDL NDKKSHKFIL SAFVDLIIAL REKEKRITRK GHVRSLSTRA ARDRLRKRMI MSDN

Arabidopsis Description

OFP14OFP14 [Source:UniProtKB/TrEMBL;Acc:A0A178W942]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.