Factsheet for GSMUA_Achr8P04020_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044357_P001	Maize	cytosol	36.64	40.34
EES00995	Sorghum	nucleus	34.35	38.3
EER92063	Sorghum	nucleus	33.97	37.71
TraesCS6D01G041100.1	Wheat	nucleus, plastid	33.59	36.82
TraesCS6A01G035700.1	Wheat	nucleus	33.97	36.63
TraesCS6B01G050100.1	Wheat	nucleus	33.21	36.4
KRH09849	Soybean	mitochondrion, nucleus	32.44	34.14
VIT_09s0002g04630.t01	Wine grape	mitochondrion, nucleus	35.11	33.09
HORVU6Hr1G006440.1	Barley	cytosol	30.92	32.79
Solyc03g120190.2.1	Tomato	plastid	32.82	31.27
HORVU5Hr1G056810.1	Barley	nucleus	31.68	30.86
PGSC0003DMT400014515	Potato	nucleus	33.21	30.21
TraesCS5D01G195300.1	Wheat	nucleus	30.92	29.78
TraesCS5A01G195700.1	Wheat	nucleus, plastid	30.92	29.78
Zm00001d020198_P001	Maize	nucleus	28.24	28.91
TraesCS5B01G187700.1	Wheat	nucleus	29.77	28.78
EER96623	Sorghum	nucleus	29.39	28.62
KRH47051	Soybean	nucleus	28.24	26.24
GSMUA_Achr3P30930_001	Banana	mitochondrion	20.99	26.19
GSMUA_Achr4P07580_001	Banana	plastid	19.85	24.53
AT1G79960.1	Thale cress	nucleus, plastid	27.48	24.49
CDX87287	Canola	nucleus, plastid	25.95	23.78
Bra035202.1-P	Field mustard	nucleus, plastid	25.95	23.78
CDY58777	Canola	nucleus, plastid	25.57	23.51
CDY37564	Canola	plastid	25.57	22.71
Bra008500.1-P	Field mustard	plastid	25.57	22.71
CDY41111	Canola	plastid	25.19	22.15
KRH44372	Soybean	nucleus	14.12	19.68

Protein Annotations

EnsemblPlants:GSMUA_Achr8P04020_001	EnsemblPlants:GSMUA_Achr8T04020_001	EnsemblPlantsGene:GSMUA_Achr8G04020_001	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C
PANTHER:PTHR33057	PANTHER:PTHR33057:SF29	PFAM:PF04844	PFscan:PS51754	SEG:seg	TIGRFAMs:TIGR01568
UniParc:UPI0002960703	UniProt:M0TMF5	MapMan:15.5.37	:	:	:

Description

Putative DUF623 domain containing protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G04020_001]

Coordinates

chr8:-:2749031..2750627

Molecular Weight (calculated)

29209.3 Da

IEP (calculated)

9.848

GRAVY (calculated)

-0.755

Length

262 amino acids

Sequence
(BLAST)

001: MGKKGLRKSI RVCLSKLKKV PSHLHIPNSP HPAAATAATS WLLSACKYPK TPSFAVDRGR ADDDGHDPAA TLSDVDRFLC ENFRSLYLRE DEPANLSEAT
101: PRGDEDERPP PAAFCSSERF FVSSGASSRT NEAGAEARGD GVAVVTFSKD PYDDFRRSMQ GMVDARHVEP NQPLDWDFMK ELLFCYLELN DRKVHKHILR
201: AFTDLTVSFR RRAAAERRRA PAGNKGRRRR RRSAQKAGDV RDAAPRHLLG DGETYATPTP ST

Best Arabidopsis Sequence Match ( AT1G79960.1 )
(BLAST)

001: MPNPLQKSLH GYLSKIKKET GKLQLSSSHS FSSSKNWVLG KHPKKLSFSF KHRRRSSKTR FSKEEPVYHQ DSAHAATLSD IDRFLEENFK SLCIRDDQED
101: DQHQARVTKN KEKRESSSDD SDDDDDDDDY RHRFERTWGH AVYDSPKQPP DLLRTERLSP PPGSSEGRPS METTSTSSER QSRSTLVLPE NCIAVLRYTD
201: EPQEDFRQSM VEMMESKLGM RESEVDWDLM EELLFCYLDL NDKKSHKFIL SAFVDLIIAL REKEKRITRK GHVRSLSTRA ARDRLRKRMI MSDN

Arabidopsis Description

OFP14OFP14 [Source:UniProtKB/TrEMBL;Acc:A0A178W942]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.