CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g04630.t01	Wine grape	mitochondrion, nucleus	40.56	36.33
KRH47051	Soybean	nucleus	40.96	36.17
PGSC0003DMT400014515	Potato	nucleus	41.37	35.76
Solyc03g120190.2.1	Tomato	plastid	39.36	35.64
CDY58777	Canola	nucleus, plastid	37.75	32.98
Bra035202.1-P	Field mustard	nucleus, plastid	37.35	32.52
CDX87287	Canola	nucleus, plastid	37.35	32.52
GSMUA_Achr8P04020_001	Banana	mitochondrion	34.14	32.44
AT1G79960.1	Thale cress	nucleus, plastid	37.75	31.97
Zm00001d044357_P001	Maize	cytosol	29.72	31.09
EES00995	Sorghum	nucleus	28.92	30.64
TraesCS6D01G041100.1	Wheat	nucleus, plastid	28.92	30.13
EER92063	Sorghum	nucleus	28.51	30.08
TraesCS6A01G035700.1	Wheat	nucleus	29.32	30.04
TraesCS6B01G050100.1	Wheat	nucleus	27.71	28.87
HORVU6Hr1G006440.1	Barley	cytosol	28.11	28.34
KRH44372	Soybean	nucleus	20.88	27.66
KRH71408	Soybean	cytosol	22.09	26.96
CDY41111	Canola	plastid	31.33	26.17
KRH35514	Soybean	plastid	18.88	26.11
CDY37564	Canola	plastid	30.92	26.1
Bra008500.1-P	Field mustard	plastid	30.92	26.1
KRH32029	Soybean	cytosol	22.89	26.03
TraesCS5B01G187700.1	Wheat	nucleus	28.11	25.83
TraesCS5A01G195700.1	Wheat	nucleus, plastid	27.31	25.0
TraesCS5D01G195300.1	Wheat	nucleus	27.31	25.0
Zm00001d020198_P001	Maize	nucleus	25.7	25.0
HORVU5Hr1G056810.1	Barley	nucleus	26.91	24.91
KRG91320	Soybean	plastid	18.88	24.74
EER96623	Sorghum	nucleus	25.3	23.42
KRH67233	Soybean	nucleus, plastid	22.89	22.8
KRG95550	Soybean	mitochondrion, plastid	23.29	22.14

Protein Annotations

EMBL:ACUP02009112	EnsemblPlants:KRH09849	EnsemblPlantsGene:GLYMA_15G014500	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C
PANTHER:PTHR33057	PANTHER:PTHR33057:SF29	PFAM:PF04844	PFscan:PS51754	ProteinID:KRH09849	ProteinID:KRH09849.1
SEG:seg	TIGRFAMs:TIGR01568	UniParc:UPI00023D1EC2	UniProt:I1MCN4	MapMan:15.5.37	:

Description

hypothetical protein

Coordinates

chr15:-:1162487..1163969

Molecular Weight (calculated)

28475.2 Da

IEP (calculated)

7.324

GRAVY (calculated)

-0.721

Length

249 amino acids

Sequence
(BLAST)

001: MPKKIRDYLF KIKNPRPQVR LPSKNWILSG CKHPRTPSFA LYSGRNQSHH NPVLNNNNNN DAATLADVDR FLMENFKSLY LKDEHDHQNH DQEITTPRDL
101: PGSTRFFVKP AGFSGSLVED AFTSDEAASI STINDVSSSN SYEKEALPDN SIALLTRSTS PYEDFKRSMQ EMVNNHESVV DWDFMEELLF CYLNLNEKKS
201: HKFILSAFVD LITVMRRNSE TPSNNPQSVR TVRSHRGTRN VTLEFGSSS

Best Arabidopsis Sequence Match ( AT1G79960.1 )
(BLAST)

001: MPNPLQKSLH GYLSKIKKET GKLQLSSSHS FSSSKNWVLG KHPKKLSFSF KHRRRSSKTR FSKEEPVYHQ DSAHAATLSD IDRFLEENFK SLCIRDDQED
101: DQHQARVTKN KEKRESSSDD SDDDDDDDDY RHRFERTWGH AVYDSPKQPP DLLRTERLSP PPGSSEGRPS METTSTSSER QSRSTLVLPE NCIAVLRYTD
201: EPQEDFRQSM VEMMESKLGM RESEVDWDLM EELLFCYLDL NDKKSHKFIL SAFVDLIIAL REKEKRITRK GHVRSLSTRA ARDRLRKRMI MSDN

Arabidopsis Description

OFP14OFP14 [Source:UniProtKB/TrEMBL;Acc:A0A178W942]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.