Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- nucleus 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH71408 | Soybean | cytosol | 69.86 | 75.0 |
| KRH35514 | Soybean | plastid | 32.42 | 39.44 |
| KRH67233 | Soybean | nucleus, plastid | 43.38 | 38.0 |
| KRG91320 | Soybean | plastid | 31.05 | 35.79 |
| PGSC0003DMT400049756 | Potato | mitochondrion | 36.99 | 35.53 |
| GSMUA_Achr4P07580_001 | Banana | plastid | 33.33 | 34.43 |
| KRG95550 | Soybean | mitochondrion, plastid | 41.1 | 34.35 |
| GSMUA_Achr3P30930_001 | Banana | mitochondrion | 31.96 | 33.33 |
| Zm00001d027739_P001 | Maize | nucleus, plastid | 26.48 | 31.69 |
| HORVU4Hr1G073070.1 | Barley | mitochondrion | 27.85 | 29.61 |
| Os03t0159400-01 | Rice | mitochondrion | 28.31 | 28.97 |
| TraesCS4A01G030800.1 | Wheat | mitochondrion | 26.94 | 28.78 |
| TraesCS4B01G275200.1 | Wheat | mitochondrion | 26.48 | 28.43 |
| TraesCS4D01G273800.1 | Wheat | mitochondrion | 26.48 | 28.16 |
| EER92828 | Sorghum | mitochondrion | 26.48 | 27.62 |
| KRH09849 | Soybean | mitochondrion, nucleus | 26.03 | 22.89 |
| KRH44372 | Soybean | nucleus | 15.07 | 17.55 |
| KRH47051 | Soybean | nucleus | 19.18 | 14.89 |
Protein Annotations
| EntrezGene:102663296 | MapMan:15.5.37 | EMBL:ACUP02006093 | ncoils:Coil | EnsemblPlantsGene:GLYMA_10G027500 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 |
| UniProt:K7LH24 | EnsemblPlants:KRH32029 | ProteinID:KRH32029 | ProteinID:KRH32029.1 | InterPro:Ovate | InterPro:Ovate_C |
| PFAM:PF04844 | PFscan:PS51754 | PANTHER:PTHR33057 | PANTHER:PTHR33057:SF65 | TIGRFAMs:TIGR01568 | UniParc:UPI00023C8750 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:2403942..2405109
Molecular Weight (calculated)
24722.1 Da
IEP (calculated)
6.415
GRAVY (calculated)
-0.449
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTRNLKHL NLNLNLNMCC SNSATHECES PPLSPITSSS NHNNTTQCPS PSSIMIKNFN SIYDPTLTSH DHSFSSTFFE PEPADFATAF ASQRFFFSSP
101: GLSNSLVEYN NTNKSTTRHP ALLREHGEKM KEEEEEEEKK KKVLFKGSVA VATYSPDPYV DFRRSMQEMV EARPELMDVK SNWNVLHELL LCYLALNPKS
201: THKFILGAFA DLLVSLMSF
101: GLSNSLVEYN NTNKSTTRHP ALLREHGEKM KEEEEEEEKK KKVLFKGSVA VATYSPDPYV DFRRSMQEMV EARPELMDVK SNWNVLHELL LCYLALNPKS
201: THKFILGAFA DLLVSLMSF
001: MLNTYSLTLF LTKTKTMPRV MWKNFHLCFP SNLTKPSSSP SGATSDDPNR PSILLINNFN LLYDDSSAAH RRLSKPLIHD VEPSSTFTAS TSTAANSSSS
101: SASYDDSDNY GFAPDDDSPP PDLTAVLASR RFFFSSPGCS NSITDSPDLR CRDNYDTATR LLTGGTAVKH YVQSPDPYND FRRSMQEMID AVTNAGDLRR
201: YEFLHELLLS YLSLNAADTH KFIIRAFADI LVSLLSDGHR IS
101: SASYDDSDNY GFAPDDDSPP PDLTAVLASR RFFFSSPGCS NSITDSPDLR CRDNYDTATR LLTGGTAVKH YVQSPDPYND FRRSMQEMID AVTNAGDLRR
201: YEFLHELLLS YLSLNAADTH KFIIRAFADI LVSLLSDGHR IS
Arabidopsis Description
ATOFP12ovate family protein 12 [Source:TAIR;Acc:AT1G05420]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.