Factsheet for Zm00001d031182_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d007842_P002
Zm00001d013559_P001
Zm00001d015549_P001
Zm00001d018742_P001
Zm00001d027431_P002
Zm00001d033404_P002
Zm00001d033859_P002
Zm00001d033861_P001
Zm00001d034212_P001
Zm00001d046568_P001
Zm00001d048471_P001
Zm00001d053749_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G16400.1	Zm00001d027431_P002	AT1G62990.1	15781858
AT2G16400.1	Zm00001d048471_P001	AT1G62990.1	15781858
AT2G16400.1	Zm00001d007842_P002	AT4G08150.1	15781858
AT2G16400.1	Zm00001d013559_P001	AT4G08150.1	15781858
AT2G16400.1	Zm00001d018742_P001	AT4G08150.1	15781858
AT2G16400.1	Zm00001d033404_P002	AT4G08150.1	15781858
AT2G16400.1	Zm00001d033859_P002	AT4G08150.1	15781858
AT2G16400.1	Zm00001d033861_P001	AT4G08150.1	15781858
AT2G16400.1	Zm00001d034212_P001	AT4G08150.1	15781858
AT2G16400.1	Zm00001d007842_P002	AT4G08150.1	21798944
AT2G16400.1	Zm00001d013559_P001	AT4G08150.1	21798944
AT2G16400.1	Zm00001d018742_P001	AT4G08150.1	21798944
AT2G16400.1	Zm00001d033404_P002	AT4G08150.1	21798944
AT2G16400.1	Zm00001d033859_P002	AT4G08150.1	21798944
AT2G16400.1	Zm00001d033861_P001	AT4G08150.1	21798944
AT2G16400.1	Zm00001d034212_P001	AT4G08150.1	21798944
AT2G16400.1	Zm00001d015549_P001	AT4G32040.1	15781858
AT2G16400.1	Zm00001d046568_P001	AT4G32040.1	15781858
AT2G16400.1	Zm00001d053749_P002	AT4G32040.1	15781858
AT2G16400.1	Zm00001d015549_P001	AT5G25220.1	15781858
AT2G16400.1	Zm00001d046568_P001	AT5G25220.1	15781858
AT2G16400.1	Zm00001d053749_P002	AT5G25220.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24130	Sorghum	nucleus	80.24	81.46
Os12t0636200-01	Rice	nucleus	74.55	76.97
TraesCS5A01G007800.1	Wheat	nucleus	73.35	75.38
HORVU5Hr1G001090.1	Barley	nucleus	73.2	75.35
TraesCS5D01G013300.1	Wheat	nucleus	72.9	74.92
TraesCS5B01G006400.1	Wheat	nucleus	73.2	72.66
Zm00001d013547_P002	Maize	nucleus	64.67	67.61
Zm00001d033378_P003	Maize	nucleus	65.27	66.97
GSMUA_Achr1P23300_001	Banana	extracellular	35.63	55.09
GSMUA_Achr9P21580_001	Banana	nucleus	39.52	48.35
Bra013075.1-P	Field mustard	nucleus	30.54	47.89
CDY02261	Canola	nucleus	32.19	47.88
Bra013076.1-P	Field mustard	nucleus	32.19	47.78
GSMUA_Achr4P13590_001	Banana	nucleus	40.57	47.63
CDX89711	Canola	nucleus	32.19	47.25
AT2G16400.1	Thale cress	nucleus	32.93	45.64
CDY46209	Canola	nucleus	25.75	45.5
GSMUA_Achr3P29230_001	Banana	nucleus	30.39	44.91
Bra001976.1-P	Field mustard	nucleus	29.04	43.69
VIT_03s0038g00050.t01	Wine grape	nucleus	45.06	43.56
Bra017666.1-P	Field mustard	nucleus	34.13	43.18
GSMUA_Achr4P06630_001	Banana	nucleus	36.53	43.11
AT4G34610.3	Thale cress	nucleus	33.68	42.29
Zm00001d027802_P002	Maize	nucleus	37.13	42.25
CDX71279	Canola	nucleus	22.16	38.14
Zm00001d033379_P001	Maize	nucleus	17.37	32.77
Zm00001d053151_P003	Maize	nucleus	31.74	31.59
Zm00001d035907_P001	Maize	nucleus	23.05	30.92
CDY45321	Canola	nucleus, plastid	30.99	30.22
GSMUA_Achr2P06420_001	Banana	nucleus	15.57	28.18
Zm00001d027435_P001	Maize	nucleus	23.65	25.48
Zm00001d033898_P002	Maize	nucleus	27.99	24.77
Zm00001d038355_P001	Maize	nucleus	20.36	23.61
Zm00001d010060_P001	Maize	nucleus	20.21	23.56
Zm00001d029736_P001	Maize	nucleus, plastid	23.95	23.26
Zm00001d042864_P002	Maize	nucleus	19.61	22.32
Zm00001d046223_P006	Maize	nucleus	14.97	20.37
Zm00001d016298_P001	Maize	nucleus	16.17	19.71
Zm00001d002249_P001	Maize	nucleus	8.38	15.91

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100192481	MapMan:15.5.3.5	UniProt:B4FBI0	EMBL:BT034468	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356
EMBL:KJ727607	ProteinID:ONM02283.1	ProteinID:ONM02284.1	PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom
PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF191	SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689
UniParc:UPI00017B63E6	EnsemblPlantsGene:Zm00001d031182	EnsemblPlants:Zm00001d031182_P002	EnsemblPlants:Zm00001d031182_T002	SEG:seg	:

Description

Homeobox-transcription factor 84 Homeobox-transcription factor 84

Coordinates

chr1:+:181575982..181579654

Molecular Weight (calculated)

72684.1 Da

IEP (calculated)

6.106

GRAVY (calculated)

-0.627

Length

668 amino acids

Sequence
(BLAST)

001: MATYYSSQGS EREPSQNMYS RDPGNGTASY PPLPSALGNL LYLNSPASGG PYTDFGGVQQ DCIEMPEPGH PSVMSHDSSA REIEPDMLGQ QRRSFGLARG
101: MKDEVLMRMM DGSGSHSSAA DAIHDDAPNG IQLDFGVLGS HGPPAQGGQG SLSLSLNTHI MAPALPYWPV VKADMLSPHS YDHGCGGGSG GLGSEPSRAI
201: RNSRYLKAAQ ELLDEVVNVW NSIKQKAQKE QVEAGKTEGK ENEGGGPKSE GPQESGANAA PELSTAEKQE LQNKMAKLMA MLDEVDRKYK HYYHQMQSVV
301: SSFDMVAGAG AAKPYTAVAL QTISRHFRCL KDAINDQISV IRKKLGEEES SSGREGRLTR LRYIDQQLRQ QRAFQQYGMI PQNAWRPQRG LPENSVTILR
401: AWLFEHFLHP YPKDSEKLML ARQTGLTRSQ ISNWFINARV RLWKPMIEDM YKEETGDIEQ DSNSSSDNAP AGSKAKTASS RDKEDHLARS CCTPRAVCES
501: SSQLSEPPGG ASMRAMSVAA AAAGAPMGLF QNEPGHDHDH DDSFMSLMLK EQRPNDGGGG LLLHHSAVAQ HQDENARFMA YHLAELGRYG NGNVSLTLGL
601: QRSSSSLSVP HAQQSFPGVG IGVGDDDIYN ATAAPLGVSV ASPDYESMSQ MDQRQRFEQS PLLHDFVA

Best Arabidopsis Sequence Match ( AT4G34610.2 )
(BLAST)

001: MENYPETQFI PGDSMIQNAI VSYSEESAGR ERRTEANNVS ASQERQALSR FGGVPQMQNI GQDFGSWRDQ ASDRNGFQLM SAMAGATGIL QTGQGLSLSL
101: GSQILPGIHQ ISHQNMAPRG NEYATQSFPG GNQNLDVVRT IPNSKYLKAA QQLLDEAVNV KKALKQFQAE GDKNNENPQE PNQSTQDSST NPPADISQSE
201: RQEMQSKLTK LLSMLDEVDR RYKQYYQQMQ IVVSSFDVIA GYGAAKPYTA LALQTISRHF RSLRDAISGQ ILVLRKCLGE QQDGSDGKRV GIISRLKYVD
301: QHLRQQRGFM QPQAWRPQRG LPENSVLILR AWLFEHFLHP YPKDSDKIML ARQTGLSRGQ VSNWFINARV RLWKPMVEEI YKEEFTENDS NSSSENTPKM
401: SEIGPVAADD EDRAREFSQD QTKPDHGHGY GEETRGMVQG SHMDGRRFMA VEPTYHVADT SRLGRGDVSL TLGLQNSQGQ DNVVAMSSEA YNNFSGVDIY
501: ENAIPGDEME YVNPGSRQNR INSSQLVHDF VA

Arabidopsis Description

BLH6BEL1-like homeodomain protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O65685]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.