Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G007800.1 | Wheat | nucleus | 99.54 | 99.54 |
| HORVU5Hr1G001090.1 | Barley | nucleus | 95.85 | 95.99 |
| TraesCS5B01G006400.1 | Wheat | nucleus | 98.15 | 94.8 |
| Os12t0636200-01 | Rice | nucleus | 87.23 | 87.64 |
| KXG24130 | Sorghum | nucleus | 85.23 | 84.19 |
| Zm00001d031182_P002 | Maize | nucleus | 74.92 | 72.9 |
| TraesCS4D01G022600.1 | Wheat | nucleus | 71.08 | 72.41 |
| GSMUA_Achr1P23300_001 | Banana | extracellular | 35.85 | 53.94 |
| GSMUA_Achr9P21580_001 | Banana | nucleus | 42.0 | 50.0 |
| Bra013076.1-P | Field mustard | nucleus | 32.62 | 47.11 |
| CDY02261 | Canola | nucleus | 32.46 | 46.99 |
| GSMUA_Achr4P13590_001 | Banana | nucleus | 41.08 | 46.92 |
| CDX89711 | Canola | nucleus | 32.77 | 46.81 |
| Bra013075.1-P | Field mustard | nucleus | 30.62 | 46.71 |
| GSMUA_Achr3P29230_001 | Banana | nucleus | 31.69 | 45.58 |
| AT2G16400.1 | Thale cress | nucleus | 33.54 | 45.23 |
| GSMUA_Achr4P06630_001 | Banana | nucleus | 39.23 | 45.05 |
| CDY46209 | Canola | nucleus | 25.38 | 43.65 |
| VIT_03s0038g00050.t01 | Wine grape | nucleus | 46.31 | 43.56 |
| Bra017666.1-P | Field mustard | nucleus | 34.62 | 42.61 |
| Bra001976.1-P | Field mustard | nucleus | 29.08 | 42.57 |
| AT4G34610.3 | Thale cress | nucleus | 34.31 | 41.92 |
| TraesCS4D01G279300.1 | Wheat | nucleus | 36.31 | 40.2 |
| CDX71279 | Canola | nucleus | 22.0 | 36.86 |
| TraesCS4D01G111900.1 | Wheat | nucleus | 32.62 | 31.93 |
| TraesCS7D01G019800.1 | Wheat | nucleus | 23.54 | 31.68 |
| CDY45321 | Canola | nucleus, plastid | 31.38 | 29.78 |
| TraesCS4D01G022500.1 | Wheat | nucleus | 16.92 | 29.49 |
| GSMUA_Achr2P06420_001 | Banana | nucleus | 16.0 | 28.18 |
| TraesCS1D01G193800.1 | Wheat | nucleus | 24.15 | 26.66 |
| TraesCS4D01G340700.1 | Wheat | nucleus | 23.23 | 24.63 |
| TraesCS4D01G062100.1 | Wheat | nucleus | 29.23 | 23.66 |
| TraesCS1D01G280300.1 | Wheat | nucleus | 20.77 | 23.56 |
| TraesCS3D01G357400.1 | Wheat | nucleus | 21.85 | 22.79 |
| TraesCS7D01G364500.1 | Wheat | nucleus | 15.69 | 18.55 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 |
| PFAM:PF07526 | InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF191 | SMART:SM00389 |
| SMART:SM00574 | SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS5D01G013300 | EnsemblPlants:TraesCS5D01G013300.1 | TIGR:cd00086 | SEG:seg |
Description
No Description!
Coordinates
chr5D:-:7410432..7415304
Molecular Weight (calculated)
72260.3 Da
IEP (calculated)
5.784
GRAVY (calculated)
-0.750
Length
650 amino acids
Sequence
(BLAST)
(BLAST)
001: MATYYSSPGS ERESQDMYSR DPGGASYPMS SALGNLLYLN NPSSGPYTEF SGILQTQQNF MEMPGHGHHS AMSQDSSARE SQDMLASHHG QRSFGHVKDM
101: KNEMLMHMMD GAQSGGAELI HDDPHNGAQF EFGVLNNHDS SDVPVGQGQG QGQGLSLSLN TQILAPSLPY WSIKPDMLTP NSYQESLRID DIRMKNMQSE
201: ASRAIRHSRY LKAAQEVLDE VVNVWKNIKQ KAQKEQAEPG KADGKETDGG PKSEGASQES GANAAPELST AEKQELQNKM AKLMAMLDEV DRKYKHYYHQ
301: MQNVVASFDM VAGPGSAKPY TAVALQTISR HFRCLKDAIN DQINVIRKKL GEEENSSSKE GKLTRLRYID QQLRQQRAFQ QYGMIPQNAW RPQRGLPENS
401: VTVLRAWLFE HFLHPYPKDS EKLMLARQTG LTRSQISNWF INARVRLWKP MIEDMYKEET GDLEQDSNSS SDNVSRSKNK VASSEENEDL KNARARVCET
501: SQLSDSRASI GTMNVGGAPV SFQNEANPDD SFMNLMMKDQ RSGEADEGLL LHNAVAQHSD ENARFMAYHL AELGRYGNGN VSLTLGLQHS GSGLSVPNAQ
601: ANFPGVSDDD IYNAGAPLGV SIASSDYESL NQMDQRQRFE QSPLLHDFVA
101: KNEMLMHMMD GAQSGGAELI HDDPHNGAQF EFGVLNNHDS SDVPVGQGQG QGQGLSLSLN TQILAPSLPY WSIKPDMLTP NSYQESLRID DIRMKNMQSE
201: ASRAIRHSRY LKAAQEVLDE VVNVWKNIKQ KAQKEQAEPG KADGKETDGG PKSEGASQES GANAAPELST AEKQELQNKM AKLMAMLDEV DRKYKHYYHQ
301: MQNVVASFDM VAGPGSAKPY TAVALQTISR HFRCLKDAIN DQINVIRKKL GEEENSSSKE GKLTRLRYID QQLRQQRAFQ QYGMIPQNAW RPQRGLPENS
401: VTVLRAWLFE HFLHPYPKDS EKLMLARQTG LTRSQISNWF INARVRLWKP MIEDMYKEET GDLEQDSNSS SDNVSRSKNK VASSEENEDL KNARARVCET
501: SQLSDSRASI GTMNVGGAPV SFQNEANPDD SFMNLMMKDQ RSGEADEGLL LHNAVAQHSD ENARFMAYHL AELGRYGNGN VSLTLGLQHS GSGLSVPNAQ
601: ANFPGVSDDD IYNAGAPLGV SIASSDYESL NQMDQRQRFE QSPLLHDFVA
001: MATYYKTGSS EIYSRPEFVP GNAMNYTNSF TETFPRDSTN NVSPSKEIQV LSSLGGVSQM VEIQDSGSWR DQEDNDRNRF PVMRRLGLSS QIETSRGNNN
101: NEYATQVVSG FTRTIHNSKY LKAAQELLDE TVNVKKALKQ FQPEGDKINE VKEKNLQTNT AEIPQAERQE LQSKLSKLLS ILDEVDRNYK QYYHQMQIVV
201: SSFDVIAGCG AAKPYTALAL QTISRHFRCL RDAISGQILV IRKSLGGEQD GSDGRGVGIS RLRNVDQQVR QQRALQRLGV MQPHTWRPQR GLPDSSVLVL
301: RAWLFEHFLH PYPKDSDKIM LARQTGLSRG QVSNWFINAR VRLWKPMVEE MYKEEFTDAL QENDPNQSSE NTPEITEIQE LQTESSSNNG HVPGVASSSM
401: RQNTVAHGGD RFMMVTDMTR NGNGGMSLTL GIQNSDARGD VPMSGGIDNY KNTISGTDLQ YLNSRNHQHQ IGSSQLLHDF VA
101: NEYATQVVSG FTRTIHNSKY LKAAQELLDE TVNVKKALKQ FQPEGDKINE VKEKNLQTNT AEIPQAERQE LQSKLSKLLS ILDEVDRNYK QYYHQMQIVV
201: SSFDVIAGCG AAKPYTALAL QTISRHFRCL RDAISGQILV IRKSLGGEQD GSDGRGVGIS RLRNVDQQVR QQRALQRLGV MQPHTWRPQR GLPDSSVLVL
301: RAWLFEHFLH PYPKDSDKIM LARQTGLSRG QVSNWFINAR VRLWKPMVEE MYKEEFTDAL QENDPNQSSE NTPEITEIQE LQTESSSNNG HVPGVASSSM
401: RQNTVAHGGD RFMMVTDMTR NGNGGMSLTL GIQNSDARGD VPMSGGIDNY KNTISGTDLQ YLNSRNHQHQ IGSSQLLHDF VA
Arabidopsis Description
BLH7BEL1-like homeodomain protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIW1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.