Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS4B01G280700.1 | Wheat | nucleus | 97.44 | 97.28 |
TraesCS4A01G022700.1 | Wheat | nucleus | 97.79 | 97.12 |
HORVU4Hr1G074250.1 | Barley | nucleus | 96.59 | 96.26 |
Os03t0165300-02 | Rice | endoplasmic reticulum, vacuole | 73.25 | 70.15 |
EER92806 | Sorghum | nucleus | 69.68 | 69.32 |
Zm00001d027802_P002 | Maize | nucleus | 66.61 | 66.61 |
TraesCS4D01G022600.1 | Wheat | nucleus | 40.55 | 37.3 |
TraesCS5D01G013300.1 | Wheat | nucleus | 40.2 | 36.31 |
TraesCS7D01G019800.1 | Wheat | nucleus | 27.26 | 33.13 |
TraesCS4D01G111900.1 | Wheat | nucleus | 36.8 | 32.53 |
TraesCS4D01G022500.1 | Wheat | nucleus | 19.93 | 31.37 |
TraesCS4D01G340700.1 | Wheat | nucleus | 28.28 | 27.08 |
TraesCS1D01G193800.1 | Wheat | nucleus | 26.92 | 26.83 |
TraesCS1D01G280300.1 | Wheat | nucleus | 23.34 | 23.91 |
TraesCS3D01G357400.1 | Wheat | nucleus | 23.34 | 21.99 |
TraesCS4D01G062100.1 | Wheat | nucleus | 29.47 | 21.54 |
TraesCS7D01G364500.1 | Wheat | nucleus | 16.01 | 17.09 |
GSMUA_Achr11P... | Banana | plastid | 8.52 | 12.25 |
Protein Annotations
Gene3D:1.10.10.60 | MapMan:15.5.3.5 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 |
PFAM:PF07526 | InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF139 | SMART:SM00389 |
SMART:SM00574 | SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS4D01G279300 | EnsemblPlants:TraesCS4D01G279300.1 | TIGR:cd00086 | SEG:seg |
Description
No Description!
Coordinates
chr4D:-:450330931..450332776
Molecular Weight (calculated)
62846.1 Da
IEP (calculated)
6.283
GRAVY (calculated)
-0.591
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: MATFFSTSND QRGLAGGGGG GGDMSFHHHY PMSNQYPDSS TGGLIPLPAS ILQQSHIAHG GGGDGRDDEP AAFMNSRDSA ELGGLQTQML MGDGGASAGQ
101: RTHQGGLSLS LGSQVPVSLY QYGRPGGMAA AASPTLMSPN QSAMAMAASR NAQVNVYVQN SRFLKAAREL LDEVVSVRDA IKRKGDRKDD SAGNGECGKV
201: EGDKGEENEG SSAAELSPAE RQDLQNKVTA LMAMLDQVDR RYRHYHQQMQ MVVSSFDAVA GSGAAKPYTA LALQTISRHF RSLRDAIGAQ VQSARRSLGE
301: PQDGSGAGGL SRLRYIDQHL RQQRAMQQFG MMQQPQHAWR PQRGLPESAV SVLRAWLFEH FLHPYPKDSE KVMLARQAGL SRGQVSNWFI NARVRLWKPM
401: VEEMYKEEFG AEMDSTNSSS ENAGNKHGKV DEAACSEDQD RDEFQSTSTH AGASQLLNAY KSEPVGSMDA GPLSSLGGGD MGTYAPAGLS LNHHGPGGGS
501: LLQDAFAHHG DDARFVPYGG NMGDLSGSVS LTLGLQHCNN NNNAGHVPPE QQGLLYGNPG DFDFLNGADD RQRFASSSSQ LLHDFVT
101: RTHQGGLSLS LGSQVPVSLY QYGRPGGMAA AASPTLMSPN QSAMAMAASR NAQVNVYVQN SRFLKAAREL LDEVVSVRDA IKRKGDRKDD SAGNGECGKV
201: EGDKGEENEG SSAAELSPAE RQDLQNKVTA LMAMLDQVDR RYRHYHQQMQ MVVSSFDAVA GSGAAKPYTA LALQTISRHF RSLRDAIGAQ VQSARRSLGE
301: PQDGSGAGGL SRLRYIDQHL RQQRAMQQFG MMQQPQHAWR PQRGLPESAV SVLRAWLFEH FLHPYPKDSE KVMLARQAGL SRGQVSNWFI NARVRLWKPM
401: VEEMYKEEFG AEMDSTNSSS ENAGNKHGKV DEAACSEDQD RDEFQSTSTH AGASQLLNAY KSEPVGSMDA GPLSSLGGGD MGTYAPAGLS LNHHGPGGGS
501: LLQDAFAHHG DDARFVPYGG NMGDLSGSVS LTLGLQHCNN NNNAGHVPPE QQGLLYGNPG DFDFLNGADD RQRFASSSSQ LLHDFVT
001: MATYYKTGSS EIYSRPEFVP GNAMNYTNSF TETFPRDSTN NVSPSKEIQV LSSLGGVSQM VEIQDSGSWR DQEDNDRNRF PVMRRLGLSS QIETSRGNNN
101: NEYATQVVSG FTRTIHNSKY LKAAQELLDE TVNVKKALKQ FQPEGDKINE VKEKNLQTNT AEIPQAERQE LQSKLSKLLS ILDEVDRNYK QYYHQMQIVV
201: SSFDVIAGCG AAKPYTALAL QTISRHFRCL RDAISGQILV IRKSLGGEQD GSDGRGVGIS RLRNVDQQVR QQRALQRLGV MQPHTWRPQR GLPDSSVLVL
301: RAWLFEHFLH PYPKDSDKIM LARQTGLSRG QVSNWFINAR VRLWKPMVEE MYKEEFTDAL QENDPNQSSE NTPEITEIQE LQTESSSNNG HVPGVASSSM
401: RQNTVAHGGD RFMMVTDMTR NGNGGMSLTL GIQNSDARGD VPMSGGIDNY KNTISGTDLQ YLNSRNHQHQ IGSSQLLHDF VA
101: NEYATQVVSG FTRTIHNSKY LKAAQELLDE TVNVKKALKQ FQPEGDKINE VKEKNLQTNT AEIPQAERQE LQSKLSKLLS ILDEVDRNYK QYYHQMQIVV
201: SSFDVIAGCG AAKPYTALAL QTISRHFRCL RDAISGQILV IRKSLGGEQD GSDGRGVGIS RLRNVDQQVR QQRALQRLGV MQPHTWRPQR GLPDSSVLVL
301: RAWLFEHFLH PYPKDSDKIM LARQTGLSRG QVSNWFINAR VRLWKPMVEE MYKEEFTDAL QENDPNQSSE NTPEITEIQE LQTESSSNNG HVPGVASSSM
401: RQNTVAHGGD RFMMVTDMTR NGNGGMSLTL GIQNSDARGD VPMSGGIDNY KNTISGTDLQ YLNSRNHQHQ IGSSQLLHDF VA
Arabidopsis Description
BLH7BEL1-like homeodomain protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIW1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.