Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G281100.1 | Wheat | nucleus | 98.08 | 97.91 |
| TraesCS1B01G290200.1 | Wheat | nucleus | 96.86 | 95.69 |
| EES18336 | Sorghum | nucleus | 78.19 | 78.6 |
| Os05t0455200-01 | Rice | nucleus | 79.06 | 78.1 |
| Zm00001d038355_P001 | Maize | nucleus | 76.44 | 76.04 |
| Zm00001d010060_P001 | Maize | nucleus | 71.2 | 71.2 |
| HORVU1Hr1G072850.1 | Barley | nucleus, plastid | 93.54 | 67.51 |
| GSMUA_Achr10P... | Banana | nucleus | 11.34 | 63.73 |
| TraesCS3D01G357400.1 | Wheat | nucleus | 64.57 | 59.39 |
| GSMUA_Achr7P14960_001 | Banana | nucleus | 42.41 | 55.23 |
| Solyc10g086640.1.1 | Tomato | nucleus | 22.69 | 50.39 |
| GSMUA_Achr10P... | Banana | plastid | 8.03 | 47.42 |
| GSMUA_Achr5P07020_001 | Banana | nucleus | 41.88 | 45.71 |
| PGSC0003DMT400062353 | Potato | nucleus | 37.17 | 42.18 |
| Solyc09g011380.2.1 | Tomato | nucleus | 36.47 | 41.47 |
| CDY10473 | Canola | nucleus | 37.7 | 37.57 |
| KRH00065 | Soybean | nucleus | 37.52 | 37.52 |
| VIT_08s0007g01290.t01 | Wine grape | nucleus | 41.88 | 37.38 |
| KRH75724 | Soybean | nucleus | 39.62 | 37.27 |
| CDY48107 | Canola | nucleus | 37.35 | 37.22 |
| AT5G02030.1 | Thale cress | nucleus | 37.35 | 37.22 |
| CDY40327 | Canola | nucleus | 37.35 | 37.02 |
| Bra005703.1-P | Field mustard | nucleus | 36.82 | 37.02 |
| CDY69132 | Canola | nucleus | 37.0 | 36.93 |
| Bra028883.1-P | Field mustard | nucleus | 37.52 | 36.82 |
| Bra009618.1-P | Field mustard | nucleus | 37.52 | 36.69 |
| KRH65931 | Soybean | nucleus | 39.44 | 36.63 |
| PGSC0003DMT400049235 | Potato | nucleus | 35.78 | 35.65 |
| CDY55113 | Canola | nucleus | 32.11 | 35.18 |
| CDX80798 | Canola | nucleus | 31.59 | 34.02 |
| VIT_13s0019g02450.t01 | Wine grape | nucleus | 27.92 | 32.13 |
| TraesCS7D01G019800.1 | Wheat | nucleus | 23.56 | 27.95 |
| TraesCS1D01G193800.1 | Wheat | nucleus | 27.92 | 27.16 |
| TraesCS4D01G022500.1 | Wheat | nucleus | 16.58 | 25.47 |
| TraesCS4D01G340700.1 | Wheat | nucleus | 26.18 | 24.47 |
| TraesCS4D01G279300.1 | Wheat | nucleus | 23.91 | 23.34 |
| TraesCS4D01G111900.1 | Wheat | nucleus | 26.88 | 23.19 |
| TraesCS4D01G062100.1 | Wheat | nucleus | 30.72 | 21.92 |
| TraesCS4D01G022600.1 | Wheat | nucleus | 24.26 | 21.79 |
| TraesCS5D01G013300.1 | Wheat | nucleus | 23.56 | 20.77 |
| TraesCS7D01G364500.1 | Wheat | nucleus | 16.58 | 17.27 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 |
| InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF91 | SMART:SM00389 | SMART:SM00574 |
| SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS1D01G280300 | EnsemblPlants:TraesCS1D01G280300.1 | TIGR:cd00086 | SEG:seg | : |
Description
No Description!
Coordinates
chr1D:+:378699329..378703317
Molecular Weight (calculated)
61888.4 Da
IEP (calculated)
8.489
GRAVY (calculated)
-0.571
Length
573 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSAAGGYGG GAEHQHQQHH QHQLLLGQAA AGQLYHVPQH SRREKLRFPP DPADSSSPTP GAWPPPTVPF YSYASSSSSY SPHSPTLAHA HNQLLVHGMP
101: AGAQIPSQNF ALSLSSSSSN PPPQQRRHLA GATGPYGPFT GYAAVLGRSR FLGPAQKLLE EICDVGGRPS QLDRCSDDGL LDLDAMDAAG DVGHEMDSSD
201: RAAAEGVTVS GAEQQWRKTR LISLMEEVCK RYRQYYQQLQ AVISSFETVA GLSNAAPFAS IALRTMSKHF KYLKSTIQSQ LRNTSKVAGG KDSLGKEDMA
301: NFGLMAGGAA LMRGSNANAF SQPHNIWRPQ RGLPERAVSV LRAWLFEHFL HPYPTDSDKQ MLAKQTGLTR NQVSNWFINA RVRLWKPMVE EIHNLEMRQG
401: HKSSAADKNQ LGPQQQTQQH SPDSSGRPSD PSNPQQGQSS SMSQGRGAHQ HHASRHIQSE LSPMTHDMAG QVSFAYNGGG MAAHHHGSIA LSHPQHVEGG
501: AGSSGGVSLT LGLHQNNRAY IAEPLPAALP LNLAHRFGLE DVSDAYAMAA SFGGQDRHFT KEMGGHLLHD FVG
101: AGAQIPSQNF ALSLSSSSSN PPPQQRRHLA GATGPYGPFT GYAAVLGRSR FLGPAQKLLE EICDVGGRPS QLDRCSDDGL LDLDAMDAAG DVGHEMDSSD
201: RAAAEGVTVS GAEQQWRKTR LISLMEEVCK RYRQYYQQLQ AVISSFETVA GLSNAAPFAS IALRTMSKHF KYLKSTIQSQ LRNTSKVAGG KDSLGKEDMA
301: NFGLMAGGAA LMRGSNANAF SQPHNIWRPQ RGLPERAVSV LRAWLFEHFL HPYPTDSDKQ MLAKQTGLTR NQVSNWFINA RVRLWKPMVE EIHNLEMRQG
401: HKSSAADKNQ LGPQQQTQQH SPDSSGRPSD PSNPQQGQSS SMSQGRGAHQ HHASRHIQSE LSPMTHDMAG QVSFAYNGGG MAAHHHGSIA LSHPQHVEGG
501: AGSSGGVSLT LGLHQNNRAY IAEPLPAALP LNLAHRFGLE DVSDAYAMAA SFGGQDRHFT KEMGGHLLHD FVG
001: MADAYEPYHV LQQSRRDKLR IPSLDSHFHF HPPPPPSSGG GGGVFPLADS DFLAAGGFHS NNNNNHISNP SYSNFMGFLG GPSSSSSTAV AVAGDHSFNA
101: GLSSGDVLVF KPEPLSLSLS SHPRLAYDLV VPGVVNSGFC RSAGEANAAA VTIASRSSGP LGPFTGYASI LKGSRFLKPA QMLLDEFCNV GRGIYTDKVI
201: DDDDSSLLFD PTVENLCGVS DGGGGDNGKK KSKLISMLDE VYKRYKQYYE QLQAVMGSFE CVAGLGHAAP YANLALKALS KHFKCLKNAI TDQLQFSHNN
301: KIQQQQQCGH PMNSENKTDS LRFGGSDSSR GLCSAGQRHG FPDHHAPVWR PHRGLPERAV TVLRAWLFDH FLHPYPTDTD KLMLAKQTGL SRNQVSNWFI
401: NARVRVWKPM VEEIHMLETR QSQRSSSSSW RDERTSTTVF PDNSNNNPSS SSAQQRPNNS SPPRRARNDD VHGTNNNNSY VNSGSGGGSA VGFSYGIGSS
501: NVPVMNSSTN GGVSLTLGLH HQIGLPEPFP MTTAQRFGLD GGSGDGGGGY EGQNRQFGRD FIGGSNHQFL HDFVG
101: GLSSGDVLVF KPEPLSLSLS SHPRLAYDLV VPGVVNSGFC RSAGEANAAA VTIASRSSGP LGPFTGYASI LKGSRFLKPA QMLLDEFCNV GRGIYTDKVI
201: DDDDSSLLFD PTVENLCGVS DGGGGDNGKK KSKLISMLDE VYKRYKQYYE QLQAVMGSFE CVAGLGHAAP YANLALKALS KHFKCLKNAI TDQLQFSHNN
301: KIQQQQQCGH PMNSENKTDS LRFGGSDSSR GLCSAGQRHG FPDHHAPVWR PHRGLPERAV TVLRAWLFDH FLHPYPTDTD KLMLAKQTGL SRNQVSNWFI
401: NARVRVWKPM VEEIHMLETR QSQRSSSSSW RDERTSTTVF PDNSNNNPSS SSAQQRPNNS SPPRRARNDD VHGTNNNNSY VNSGSGGGSA VGFSYGIGSS
501: NVPVMNSSTN GGVSLTLGLH HQIGLPEPFP MTTAQRFGLD GGSGDGGGGY EGQNRQFGRD FIGGSNHQFL HDFVG
Arabidopsis Description
BLH9BEL1-like homeodomain protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.