Factsheet for HORVU1Hr1G072850.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G072850.1
HORVU2Hr1G061320.3
HORVU3Hr1G072010.1
HORVU3Hr1G085720.1
HORVU4Hr1G003360.1
HORVU4Hr1G003410.3
HORVU4Hr1G009730.1
HORVU5Hr1G098570.6
HORVU6Hr1G028610.2
HORVU7Hr1G114650.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02030.1	HORVU2Hr1G061320.3	AT4G08150.1	12897247
AT5G02030.1	HORVU4Hr1G003360.1	AT4G08150.1	12897247
AT5G02030.1	HORVU4Hr1G003410.3	AT4G08150.1	12897247
AT5G02030.1	HORVU4Hr1G009730.1	AT4G08150.1	12897247
AT5G02030.1	HORVU5Hr1G098570.6	AT4G08150.1	12897247
AT5G02030.1	HORVU2Hr1G061320.3	AT4G08150.1	15019989
AT5G02030.1	HORVU4Hr1G003360.1	AT4G08150.1	15019989
AT5G02030.1	HORVU4Hr1G003410.3	AT4G08150.1	15019989
AT5G02030.1	HORVU4Hr1G009730.1	AT4G08150.1	15019989
AT5G02030.1	HORVU5Hr1G098570.6	AT4G08150.1	15019989
AT5G02030.1	HORVU2Hr1G061320.3	AT4G08150.1	15781858
AT5G02030.1	HORVU4Hr1G003360.1	AT4G08150.1	15781858
AT5G02030.1	HORVU4Hr1G003410.3	AT4G08150.1	15781858
AT5G02030.1	HORVU4Hr1G009730.1	AT4G08150.1	15781858
AT5G02030.1	HORVU5Hr1G098570.6	AT4G08150.1	15781858
AT5G02030.1	HORVU6Hr1G028610.2	AT4G32040.1	15781858
AT5G02030.1	HORVU7Hr1G114650.2	AT4G32040.1	15781858
AT5G02030.1	HORVU1Hr1G072850.1	AT5G02030.1	15781858
AT5G02030.1	HORVU3Hr1G072010.1	AT5G02030.1	15781858
AT5G02030.1	HORVU3Hr1G085720.1	AT5G02030.1	15781858
AT5G02030.1	HORVU6Hr1G028610.2	AT5G25220.1	15781858
AT5G02030.1	HORVU7Hr1G114650.2	AT5G25220.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G281100.1	Wheat	nucleus	67.76	93.73
TraesCS1D01G280300.1	Wheat	nucleus	67.51	93.54
TraesCS1B01G290200.1	Wheat	nucleus	68.26	93.45
Os05t0455200-01	Rice	nucleus	57.05	78.1
EES18336	Sorghum	nucleus	55.92	77.89
Zm00001d038355_P001	Maize	nucleus	54.66	75.35
Zm00001d010060_P001	Maize	nucleus	51.39	71.2
HORVU3Hr1G072010.1	Barley	mitochondrion	10.58	65.62
GSMUA_Achr10P...	Banana	nucleus	8.06	62.75
GSMUA_Achr7P14960_001	Banana	nucleus	29.97	54.09
Solyc10g086640.1.1	Tomato	nucleus	16.25	50.0
GSMUA_Achr10P...	Banana	plastid	5.92	48.45
GSMUA_Achr5P07020_001	Banana	nucleus	31.99	48.38
PGSC0003DMT400062353	Potato	nucleus	27.2	42.77
Solyc09g011380.2.1	Tomato	nucleus	26.7	42.06
VIT_08s0007g01290.t01	Wine grape	nucleus	30.86	38.16
CDY10473	Canola	nucleus	27.58	38.09
KRH00065	Soybean	nucleus	27.46	38.05
KRH75724	Soybean	nucleus	29.09	37.93
CDY48107	Canola	nucleus	27.33	37.74
AT5G02030.1	Thale cress	nucleus	27.33	37.74
Bra005703.1-P	Field mustard	nucleus	26.95	37.54
CDY40327	Canola	nucleus	27.33	37.54
CDY69132	Canola	nucleus	27.08	37.46
Bra028883.1-P	Field mustard	nucleus	27.46	37.33
KRH65931	Soybean	nucleus	28.97	37.28
Bra009618.1-P	Field mustard	nucleus	27.46	37.2
HORVU3Hr1G085720.1	Barley	nucleus, plastid	34.89	36.79
PGSC0003DMT400049235	Potato	nucleus	26.2	36.17
CDY55113	Canola	nucleus	23.55	35.76
CDX80798	Canola	nucleus	23.17	34.59
VIT_13s0019g02450.t01	Wine grape	nucleus	19.9	31.73
HORVU1Hr1G049760.1	Barley	nucleus	20.03	26.68
HORVU4Hr1G003750.1	Barley	nucleus	11.08	25.73
HORVU4Hr1G084590.2	Barley	nucleus	19.02	24.28
HORVU4Hr1G074250.1	Barley	nucleus	17.51	23.6
HORVU4Hr1G010430.6	Barley	nucleus	23.93	23.49
HORVU4Hr1G020710.1	Barley	nucleus	14.86	22.69
HORVU5Hr1G001090.1	Barley	nucleus	17.25	21.11
HORVU4Hr1G003800.7	Barley	nucleus	17.0	20.96
HORVU7Hr1G088090.4	Barley	nucleus	9.95	14.26

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	UniProt:A0A287G785	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU1Hr1G072850
EnsemblPlants:HORVU1Hr1G072850.1	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	PFAM:PF05920
PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF91	SMART:SM00389
SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI000B4647EF	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr1H:+:499314439..499319533

Molecular Weight (calculated)

85806.6 Da

IEP (calculated)

10.527

GRAVY (calculated)

-0.674

Length

794 amino acids

Sequence
(BLAST)

001: PSASIKPGKA HCPAPKYKTH HPWRQPGSLS LSRSGHLSIF HRSTSSSSHG QTRTDQHQLP FCLSLSLLTI SRRPPPSFTS SSAAASLAAR TFAERKKERK
101: KGRKERHLTR TQPSPTPPPK THKSRGTSDQ VGRSSARRRT PCNCECSLPA RRSQSAGAAS FSISSPPCPP VPPSAPLSLT RTLSRASSLS YLRRAASEAG
201: RAYVRAHSRS RAAAMSSAAG GYGGGADHQH QHQHQHQLLL GQAAAGQLYH VPQHSRRDKL RFPPDPADSS PPTPGAWPPP TVPFYSYASS SSSYSPHSPT
301: LAHAHAHNQL LAHGMPVGAQ IPSQNFALSL SSSSSNPPPQ QRRHLAGATG PYGPFTGYAA VLGRSRFLGP AQKLLEEICD VGGRPSQLDR CSDDGLLDLD
401: AMDAAAEGGH EMDSSDRAAA EGGTVSGAEQ QWRKTRLISL MEEVCKRYRQ YYQQLQAVIT SFETVAGLSN AAPFASIALR TMSKHFKYLK STIQNQLRNT
501: SKAAAGKDSL GKEDMAFGLM GGGAALMRGG NANAFSQPHN IWRPQRGLPE RAVSVLRAWL FEHFLHPYPT DSDKQMLAKQ TGLTRNQVSN WFINARVRLW
601: KPMVEEIHNL EMRQGHKSSG ADKNQLGSAQ QQMQQHSPDS SGRPSDPSNS QQAGQSSSGM TQNRGGNHQA HRHVQNELSP MTHDMPGQVS FAYNGGGLAA
701: HHHHHHHSMA LSHPHQQVEG GAGSSGGVSL TLGLHQNNRA YIAEPLPAAL PLNLAHRFGL EDVSDAYAMA ASFGGQDRHF TKEMGGHLLH DFVG

Best Arabidopsis Sequence Match ( AT5G02030.1 )
(BLAST)

001: MADAYEPYHV LQQSRRDKLR IPSLDSHFHF HPPPPPSSGG GGGVFPLADS DFLAAGGFHS NNNNNHISNP SYSNFMGFLG GPSSSSSTAV AVAGDHSFNA
101: GLSSGDVLVF KPEPLSLSLS SHPRLAYDLV VPGVVNSGFC RSAGEANAAA VTIASRSSGP LGPFTGYASI LKGSRFLKPA QMLLDEFCNV GRGIYTDKVI
201: DDDDSSLLFD PTVENLCGVS DGGGGDNGKK KSKLISMLDE VYKRYKQYYE QLQAVMGSFE CVAGLGHAAP YANLALKALS KHFKCLKNAI TDQLQFSHNN
301: KIQQQQQCGH PMNSENKTDS LRFGGSDSSR GLCSAGQRHG FPDHHAPVWR PHRGLPERAV TVLRAWLFDH FLHPYPTDTD KLMLAKQTGL SRNQVSNWFI
401: NARVRVWKPM VEEIHMLETR QSQRSSSSSW RDERTSTTVF PDNSNNNPSS SSAQQRPNNS SPPRRARNDD VHGTNNNNSY VNSGSGGGSA VGFSYGIGSS
501: NVPVMNSSTN GGVSLTLGLH HQIGLPEPFP MTTAQRFGLD GGSGDGGGGY EGQNRQFGRD FIGGSNHQFL HDFVG

Arabidopsis Description

BLH9BEL1-like homeodomain protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.