Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G191800.1 | Wheat | nucleus | 92.95 | 94.7 |
| TraesCS1D01G193800.1 | Wheat | nucleus | 93.46 | 94.57 |
| TraesCS1A01G183400.1 | Wheat | nucleus | 92.28 | 93.86 |
| Os10t0534900-01 | Rice | nucleus | 60.07 | 61.09 |
| EER92018 | Sorghum | nucleus | 59.9 | 56.31 |
| HORVU4Hr1G084590.2 | Barley | nucleus | 55.2 | 52.89 |
| Zm00001d029736_P001 | Maize | nucleus, plastid | 59.56 | 51.6 |
| CDY45383 | Canola | nucleus | 21.14 | 47.91 |
| GSMUA_Achr1P06400_001 | Banana | nucleus | 35.07 | 40.5 |
| GSMUA_Achr2P04310_001 | Banana | nucleus | 36.74 | 39.25 |
| HORVU3Hr1G072010.1 | Barley | mitochondrion | 8.39 | 39.06 |
| VIT_02s0025g00200.t01 | Wine grape | nucleus | 40.1 | 37.0 |
| PGSC0003DMT400032122 | Potato | nucleus | 38.59 | 36.33 |
| KRH77572 | Soybean | nucleus | 38.93 | 35.91 |
| KRH59951 | Soybean | nucleus | 38.26 | 35.91 |
| KRH27902 | Soybean | nucleus | 38.59 | 35.83 |
| KRH41225 | Soybean | nucleus | 38.76 | 35.76 |
| Solyc08g081400.2.1 | Tomato | nucleus | 37.75 | 34.94 |
| CDY44476 | Canola | nucleus | 33.05 | 34.68 |
| Bra025497.1-P | Field mustard | nucleus | 33.56 | 33.73 |
| AT5G41410.1 | Thale cress | nucleus | 33.72 | 32.9 |
| HORVU4Hr1G003750.1 | Barley | nucleus | 15.44 | 26.9 |
| HORVU4Hr1G074250.1 | Barley | nucleus | 26.17 | 26.49 |
| HORVU4Hr1G003800.7 | Barley | nucleus | 27.01 | 25.0 |
| HORVU5Hr1G001090.1 | Barley | nucleus | 27.01 | 24.81 |
| HORVU4Hr1G020710.1 | Barley | nucleus | 20.64 | 23.65 |
| HORVU4Hr1G010430.6 | Barley | nucleus | 31.04 | 22.87 |
| HORVU1Hr1G072850.1 | Barley | nucleus, plastid | 26.68 | 20.03 |
| HORVU3Hr1G085720.1 | Barley | nucleus, plastid | 24.33 | 19.26 |
| HORVU7Hr1G088090.4 | Barley | nucleus | 14.26 | 15.34 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | UniProt:A0A287FHL6 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU1Hr1G049760 | EnsemblPlants:HORVU1Hr1G049760.1 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 |
| PFAM:PF05920 | PFAM:PF07526 | InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF96 |
| SMART:SM00389 | SMART:SM00574 | SUPFAM:SSF46689 | UniParc:UPI000B478AEB | SEG:seg | : |
Description
No Description!
Coordinates
chrchr1H:+:368411692..368418284
Molecular Weight (calculated)
63636.2 Da
IEP (calculated)
7.125
GRAVY (calculated)
-0.515
Length
596 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHDPSQLVG YADYFAAPGS NGGGVTLVVP PEVDARAEHQ MYGAGLHHHH HHHHHHSGAD MFGARGFGMA PAGEESAQSK ADVDGSSTIS FFRGEHQQQH
101: HHHQQQLQMG QAPLSLSLHG PPDAGSSSSF MLHQHLGGGE PRLQQHQQTA AWQVQGAGSG WQLRGSSFLL PTQQLLQEFC SIPADADSKA PKKPTAQEEH
201: GGSSSSASWP PSSAQIQGMD AAELQRLKAK LYTMIEEVDR RYRRYREQMR AVAASFEAVA GQRAAAVYTR MASRTISRHF RSVRDGVAAQ VRAVRGALGE
301: KDAGAAVPGM TKGETPRLRA LDQCLRQHKA YQSGMLESHP WRPQRGLPER AVSVLRAWLF EHFLHPYPSD VDKHILARQT GLSRSQVSNW FINARVRLWK
401: PMVEEMYAEE MKDKEEGSGG DGGGQPALQA GDLANPSPAA AGSYASEGRG EQKPTRAQLH QLHDAGSLAS VVSIGQSADP QGLNFGMMDQ LDFDAYEAAT
501: AGFGNGVSLT LGLQHQQQQH HGGVNVAAFA AASPSSSSAA HGGAGAAEFV FMAGEGVHPS ANGQFGAGMG SGADVPSQYH RGLGVGGFHL LRDLAG
101: HHHQQQLQMG QAPLSLSLHG PPDAGSSSSF MLHQHLGGGE PRLQQHQQTA AWQVQGAGSG WQLRGSSFLL PTQQLLQEFC SIPADADSKA PKKPTAQEEH
201: GGSSSSASWP PSSAQIQGMD AAELQRLKAK LYTMIEEVDR RYRRYREQMR AVAASFEAVA GQRAAAVYTR MASRTISRHF RSVRDGVAAQ VRAVRGALGE
301: KDAGAAVPGM TKGETPRLRA LDQCLRQHKA YQSGMLESHP WRPQRGLPER AVSVLRAWLF EHFLHPYPSD VDKHILARQT GLSRSQVSNW FINARVRLWK
401: PMVEEMYAEE MKDKEEGSGG DGGGQPALQA GDLANPSPAA AGSYASEGRG EQKPTRAQLH QLHDAGSLAS VVSIGQSADP QGLNFGMMDQ LDFDAYEAAT
501: AGFGNGVSLT LGLQHQQQQH HGGVNVAAFA AASPSSSSAA HGGAGAAEFV FMAGEGVHPS ANGQFGAGMG SGADVPSQYH RGLGVGGFHL LRDLAG
001: MAVYYPNSVG MQSLYQESIY LNEQQQQQQQ ASSSSAASFS EIVSGDVRNN EMVFIPPTSD VAVNGNVTVS SNDLSFHGGG LSLSLGNQIQ SAVSVSPFQY
101: HYQNLSNQLS YNNLNPSTMS DENGKSLSVH QHHSDQILPS SVYNNNGNNG VGFYNNYRYE TSGFVSSVLR SRYLKPTQQL LDEVVSVRKD LKLGNKKMKN
201: DKGQDFHNGS SDNITEDDKS QSQELSPSER QELQSKKSKL LTMVDEVDKR YNQYHHQMEA LASSFEMVTG LGAAKPYTSV ALNRISRHFR CLRDAIKEQI
301: QVIRGKLGER ETSDEQGERI PRLRYLDQRL RQQRALHQQL GMVRPAWRPQ RGLPENSVSI LRAWLFEHFL HPYPKESEKI MLSKQTGLSK NQVANWFINA
401: RVRLWKPMIE EMYKEEFGES AELLSNSNQD TKKMQETSQL KHEDSSSSQQ QNQGNNNNNI PYTSDAEQNL VFADPKPDRA TTGDYDSLMN YHGFGIDDYN
501: RYVGLGNQQD GRYSNPHQLH DFVV
101: HYQNLSNQLS YNNLNPSTMS DENGKSLSVH QHHSDQILPS SVYNNNGNNG VGFYNNYRYE TSGFVSSVLR SRYLKPTQQL LDEVVSVRKD LKLGNKKMKN
201: DKGQDFHNGS SDNITEDDKS QSQELSPSER QELQSKKSKL LTMVDEVDKR YNQYHHQMEA LASSFEMVTG LGAAKPYTSV ALNRISRHFR CLRDAIKEQI
301: QVIRGKLGER ETSDEQGERI PRLRYLDQRL RQQRALHQQL GMVRPAWRPQ RGLPENSVSI LRAWLFEHFL HPYPKESEKI MLSKQTGLSK NQVANWFINA
401: RVRLWKPMIE EMYKEEFGES AELLSNSNQD TKKMQETSQL KHEDSSSSQQ QNQGNNNNNI PYTSDAEQNL VFADPKPDRA TTGDYDSLMN YHGFGIDDYN
501: RYVGLGNQQD GRYSNPHQLH DFVV
Arabidopsis Description
BLH3BEL1-like homeodomain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWS9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.