CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90950
EER91090
EER95833
EES01480
EES19813
KXG20488
KXG40306
OQU84501
OQU90921
OQU91064

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G41410.1	KXG40306	AT1G62990.1	11701881
AT5G41410.1	EER90950	AT4G08150.1	11701881
AT5G41410.1	EER91090	AT4G08150.1	11701881
AT5G41410.1	EER95833	AT4G08150.1	11701881
AT5G41410.1	OQU90921	AT4G08150.1	11701881
AT5G41410.1	OQU91064	AT4G08150.1	11701881
AT5G41410.1	EER90950	AT4G08150.1	15781858
AT5G41410.1	EER91090	AT4G08150.1	15781858
AT5G41410.1	EER95833	AT4G08150.1	15781858
AT5G41410.1	OQU90921	AT4G08150.1	15781858
AT5G41410.1	OQU91064	AT4G08150.1	15781858
AT5G41410.1	EER90950	AT4G08150.1	17873098
AT5G41410.1	EER91090	AT4G08150.1	17873098
AT5G41410.1	EER95833	AT4G08150.1	17873098
AT5G41410.1	OQU90921	AT4G08150.1	17873098
AT5G41410.1	OQU91064	AT4G08150.1	17873098
AT5G41410.1	EES01480	AT4G18830.1	15781858
AT5G41410.1	EES19813	AT4G18830.1	15781858
AT5G41410.1	KXG20488	AT4G32040.1	11701881
AT5G41410.1	OQU84501	AT4G32040.1	11701881
AT5G41410.1	KXG20488	AT4G32040.1	17873098
AT5G41410.1	OQU84501	AT4G32040.1	17873098
AT5G41410.1	KXG20488	AT5G11060.1	11701881
AT5G41410.1	OQU84501	AT5G11060.1	11701881
AT5G41410.1	KXG20488	AT5G25220.1	11701881
AT5G41410.1	OQU84501	AT5G25220.1	11701881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029736_P001	Maize	nucleus, plastid	77.13	71.08
TraesCS1B01G191800.1	Wheat	nucleus	57.1	61.88
TraesCS1D01G193800.1	Wheat	nucleus	56.47	60.78
TraesCS1A01G183400.1	Wheat	nucleus	55.99	60.58
HORVU1Hr1G049760.1	Barley	nucleus	56.31	59.9
Os10t0534900-01	Rice	nucleus	53.79	58.19
KXG40303	Sorghum	nucleus	53.47	54.15
CDY45383	Canola	nucleus	19.4	46.77
GSMUA_Achr1P06400_001	Banana	nucleus	33.28	40.89
EER89055	Sorghum	nucleus	33.12	40.08
GSMUA_Achr2P04310_001	Banana	nucleus	34.23	38.89
VIT_02s0025g00200.t01	Wine grape	nucleus	35.65	34.98
KRH27902	Soybean	nucleus	34.7	34.27
KRH77572	Soybean	nucleus	34.86	34.21
KRH41225	Soybean	nucleus	34.38	33.75
CDY44476	Canola	nucleus	29.81	33.27
KRH59951	Soybean	nucleus	33.12	33.07
Bra025497.1-P	Field mustard	nucleus	30.28	32.38
PGSC0003DMT400032122	Potato	nucleus	32.02	32.07
Solyc08g081400.2.1	Tomato	nucleus	32.33	31.83
AT5G41410.1	Thale cress	nucleus	30.6	31.75
KXG37846	Sorghum	nucleus	16.4	29.21
EER92806	Sorghum	nucleus	25.55	27.46
EES18336	Sorghum	nucleus	24.61	27.37
KXG24130	Sorghum	nucleus	26.66	25.68
EES09309	Sorghum	nucleus	27.92	25.65
EER91079	Sorghum	nucleus	26.03	25.42
EES03882	Sorghum	nucleus	23.66	25.3
EER93512	Sorghum	nucleus, plastid	29.02	23.9
KXG20197	Sorghum	nucleus	14.35	18.42
EES04785	Sorghum	nucleus	15.62	17.55

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	EntrezGene:8062869	UniProt:C5WUF2	ncoils:Coil	EnsemblPlants:EER92018
ProteinID:EER92018	ProteinID:EER92018.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain
InterPro:Homeobox_dom	InterPro:IPR001356	ProteinID:KXG39018.1	ProteinID:OQU92243.1	PFAM:PF05920	PFAM:PF07526
InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF96	SMART:SM00389	SMART:SM00574
EnsemblPlantsGene:SORBI_3001G314900	SUPFAM:SSF46689	unigene:Sbi.129	UniParc:UPI0001A825B5	RefSeq:XP_002465020.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:60313504..60320531

Molecular Weight (calculated)

66728.0 Da

IEP (calculated)

6.833

GRAVY (calculated)

-0.393

Length

634 amino acids

Sequence
(BLAST)

001: MAHDEQAGLA YADYFAAAAA AGAVATLVPE VDDDAVAGAG EEEEDLHLYG VHHQHGVELF GPSRGHMLPA ATMMAGGHAA AAAHGKAAAL GLVDVDVASP
101: VVGGHDFGDH HHRQQGLQAP LSLALHHHHH QQQLGGGGVP RHNQLSAAWP GPQQQQGQGA AWHLRGSRFL RPTQQLLQEF CTLPVDTTTT AAASKQPASE
201: DGVGVGSSTS APSAQIHAMS ASELQRLKAK LYAMLQEVER RYRRYREQMR AVAGSFEAVA GEQAAVAYTR LASRTISKHF RSLRDGVAAQ MQVVRRALGE
301: KDADGGVPAA GGMVKGETTP RLRVIDQCLR QHRAYQAGVL ESQPWRPQRG LPERAVSILR AWLFEHFLHP YPSDVDKHIL ARQTGLSRSQ VSNWFINARV
401: RLWKPMVEEM YSEEMKDPQE GGGGAACSNA NNNSVNTSSY TSELGQQQLG HGGGASGVDG RGGERKPTRA QLLVHDAGSL ASVVSIGSSS RDQQQQMSSI
501: NFGMMDHLDF DAYNDDPTAA GPGGPAGGFG AGGSGGVSLT LGLQHQHADD PHGGVNIAFA GAAPSAAHEF LFMAGGGEQQ MVAGGAVHPS HGHGHGHHGQ
601: FSAAGMQGDG VPSSHYHRGL SAATGFQLLH DLAG

Best Arabidopsis Sequence Match ( AT2G23760.1 )
(BLAST)

001: MGLATTTSSM SQDYHHHQGI FSFSNGFHRS SSTTHQEEVD ESAVVSGAQI PVYETAGMLS EMFAYPGGGG GGSGGEILDQ STKQLLEQQN RHNNNNNSTL
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF

Arabidopsis Description

BLH4BEL1-like homeodomain 4 [Source:TAIR;Acc:AT2G23760]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.