CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027802_P002	Maize	nucleus	88.14	88.59
Os03t0165300-02	Rice	endoplasmic reticulum, vacuole	78.64	75.69
TraesCS4D01G279300.1	Wheat	nucleus	69.32	69.68
HORVU4Hr1G074250.1	Barley	nucleus	69.15	69.27
TraesCS4B01G280700.1	Wheat	nucleus	68.64	68.88
TraesCS4A01G022700.1	Wheat	nucleus	68.98	68.87
EER91079	Sorghum	nucleus	42.2	38.37
KXG24130	Sorghum	nucleus	42.03	37.69
KXG37846	Sorghum	nucleus	19.49	32.3
EES09309	Sorghum	nucleus	35.59	30.43
EER89055	Sorghum	nucleus	26.78	30.15
KXG40303	Sorghum	nucleus	28.14	26.52
EER92018	Sorghum	nucleus	27.46	25.55
EES18336	Sorghum	nucleus	22.54	23.33
EER93512	Sorghum	nucleus, plastid	29.32	22.47
EES03882	Sorghum	nucleus	21.53	21.42
KXG20197	Sorghum	nucleus	15.59	18.62
EES04785	Sorghum	nucleus	17.29	18.09
GSMUA_Achr11P...	Banana	plastid	7.12	10.29

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	EntrezGene:8082140	UniProt:C5WWV8	ncoils:Coil	EnsemblPlants:EER92806
ProteinID:EER92806	ProteinID:EER92806.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain
InterPro:Homeobox_dom	InterPro:IPR001356	PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071
PANTHER:PTHR11850	PANTHER:PTHR11850:SF139	SMART:SM00389	SMART:SM00574	EnsemblPlantsGene:SORBI_3001G494000	SUPFAM:SSF46689
unigene:Sbi.2842	UniParc:UPI0001A82ACF	RefSeq:XP_002465808.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:76310773..76314880

Molecular Weight (calculated)

62835.0 Da

IEP (calculated)

6.302

GRAVY (calculated)

-0.460

Length

590 amino acids

Sequence
(BLAST)

001: MATFFSTSTN QRDLTGGGGD MSFHHYTYSD SPAGGLMPFP ATIVSEGHVA HGGDDGRDEP AAFVNVNVNA RDGTTSGAEM GLQTQLLMAN ASAAVQHQGL
101: SLSLGTQGVP VSLYQYRQAQ QAGMAAAASL LSPNQASAAA SRNAQSIYIQ NSKYLKAARE LLDEVVNVRD AIKRKGADKN QQGKDSGGEG KDAETSDDKA
201: DEHEGNSSAA ELTPSERQDL QNKVSALMAL LDQVDRKYRH YHHQMQIVMS SFDAVAGAGA ARPYTALALQ TISRHFRSLR DAVGAQVQSL RRSLGEKDTS
301: AHGGGLSRLR YIDQQLRQQR AMQQFGMMQQ PQHAWRPQRG LPESAVSVLR AWLFEHFLHP YPKDSEKLML ARQTGLSRGQ VSNWFINARV RLWKPMIEEM
401: YKEEFGAEMD SHSSSENAAG NKGKADEAIS SEDHDEFQSP SSAAAKHGAA AGHHLSAFKS EAIGGMDAAG VGVGVGLSSL DGAIGPYATS LNLGAAVVGN
501: GLQEAFAHHH GGGDARFVQA YGDMAGLGGY DGGSVSLTLG LQHCNDAGAV PAEQQGGLLY GNAGDFEFIN GSAEDRQRFG SSQLLHDFVA

Best Arabidopsis Sequence Match ( AT2G16400.1 )
(BLAST)

001: MATYYKTGSS EIYSRPEFVP GNAMNYTNSF TETFPRDSTN NVSPSKEIQV LSSLGGVSQM VEIQDSGSWR DQEDNDRNRF PVMRRLGLSS QIETSRGNNN
101: NEYATQVVSG FTRTIHNSKY LKAAQELLDE TVNVKKALKQ FQPEGDKINE VKEKNLQTNT AEIPQAERQE LQSKLSKLLS ILDEVDRNYK QYYHQMQIVV
201: SSFDVIAGCG AAKPYTALAL QTISRHFRCL RDAISGQILV IRKSLGGEQD GSDGRGVGIS RLRNVDQQVR QQRALQRLGV MQPHTWRPQR GLPDSSVLVL
301: RAWLFEHFLH PYPKDSDKIM LARQTGLSRG QVSNWFINAR VRLWKPMVEE MYKEEFTDAL QENDPNQSSE NTPEITEIQE LQTESSSNNG HVPGVASSSM
401: RQNTVAHGGD RFMMVTDMTR NGNGGMSLTL GIQNSDARGD VPMSGGIDNY KNTISGTDLQ YLNSRNHQHQ IGSSQLLHDF VA

Arabidopsis Description

BLH7BEL1-like homeodomain protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIW1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.